Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3555 ATGGCTGAAGATCAGTCTGTAGTTGGCAGAAGGCGTATCTACTATGACCAACATGGAAGTGAAGCATTGATATGCAGTGACAGTGAGGAAGAGCTAACGGAACCTGAGGAAGATAAGCATGAATTTACTGATGCTGAAGACCGAATTTTATGGATGGCGTTTGAGGAATATGGGTTAACTGAGGAAGTGTTGGATACTGTGAGCGAGTCTGTTGGAGGTACTAGACAGGAAATTCAGGATAGGTACAAAAGTCTCAAGGAAAAGAACATGAGGAGGTGGGACCAGCAGTCTGAAGGTTCTGGAAATTATGAATCTCAGATTGGTATAAGTTTGGAGGAAAGCCTGAGTACTGCTTTAGATTCTTTTGATAACCTTTTTTGTCGTCGATGCATGCAGATGTTTGATTGTCGCTTGCATGGATGTTCTCAACCCCTAATATATCCTAGTGAAAAGCAGCCAGTTTGGTTTGAGCATGAAGAGGACAGGAAGCCATGCAGCGATCAGTGTTACCTAAGGTTAAAGTCTGAGAAAATTTCATCAGATCCTAGTTGTTTACATGAAAATAAAACCACAACTATGGAAGAGGAAGTATTGACTTTGGCACCCTCCGGTGCAGAAGAGCCAGGAAAGCAGGGCACTGCAACTACCTTGGTGGAAGAAAGATGCAATTCTATGAATACAACACCTTTTCTGACAGAACTTGCCGGTTGTGGAGGTCTCAACTTAAATATGCCTGTGGCAGAGAGTCGGGGGAAACGGAAGACCATAAATCGATCAGATATAGCACTGTGTGACTTAACATTGCTTTCTGATGATTCACAAAGTTCTTGTAAAAAGCAAAAGAAAAACACAGATATTGATGCAGTCACTACAATCAATGATAATAACAGAGACCTAAATGTCAGTGCATGTGATGAAAAATGTGTTGCTGCTTCTGAATGTTTGAGTGATTCTGTAGATCATACTTCTAACAAATCAATACTTTCTGGGAGCACTTGTCATGGTGAACATGAAAATGTTGGGGATGGACCTAAAGATGACATGGCTGAGGCAGAATTCAGTGAGTCATCCAATTTCATGAATAAGCATGTTGAAGGGATGCAAAGACTCTCAGAATGGAAACCTATGGAGAAAGAGCTATACTTGAAGGGAATAGAAATGTTTGGGAGAAACAGTTGCCTCATAACAAGGAACTTACTTTCTGGCCTTAAGACCTGCATGGAAGTAGCTAGTTACATGCATGCTGGTGGAGCATCAATGCCCTACAGATCTAATGTTCCACCAAGTTCACTCAGGAATGACAACGGAAAAACTGATGCAGAATGCACAGACCAAGAGATGCCAACAAGAGCGAGATTGCTACGGAAAAGGGGCAAAACAAGGAAATTTAAATATTCTTGGAAGTCTGCCGGCCACCCATCAATATGGAAAAGAATTGCGGATGGAAAAAACCAATCTTGCAAGCAATATACGCCCTGTGGATGTCAGTCAATGTGTGGAAAGCAATGTCCGTGCCTTCATAATGGAACTTGCTGTGAAAAATATTGTGGATGCTCCAAAAGCTGCAAAAATCGATTCAGAGGTTGTCACTGTGCTAAGAGTCAATGCAGAAGTCGACAATGTCCATGCTTTGCTGCTGGACGCGAATGTGATCCAGATGTTTGCCGAAACTGCTGGGTTAGCTGTGGGGATGGTTCATTGGGAGAACCACCTAGACGTGGAGATGGTCAATGTGGAAATATGAGGCTTCTTTTAAGGCAACAACAGAGGATTCTTTTGGCAAAGTCTGATGTTGCAGGATGGGGAGCATTCTTAAAGAACCCAGTTAACAAAAATGATTATCTAGGAGAATACACTGGGGAACTGATCTCCCACCGAGAAGCAGACAAGCGTGGAAAAATATATGATCGTGCGAACTCATCATTCCTTTTTGACTTGAATGATCAGTATGTTCTGGATGCTTATCGCAAAGGAGACAAACTAAAATTTGCCAACCACTCATCAAATCCAAACTGCTATGCAAAGGTGATGCTGGTTGCTGGGGATCATCGAGTTGGCATCTTTGCCAAGGAACACATCGAAGCTAGTGAGGAGCTGTTCTATGATTATCGTTATGGTCCAGATCAAGCACCCGCTTGGGCTCGTAAACCTGAGTCTTCAAGGAGAGATGAATCAGCAGCTTCTCAAGGCAGGGCCAAGAAACACCAGTCTCATTGA 2217 0.4276 MAEDQSVVGRRRIYYDQHGSEALICSDSEEELTEPEEDKHEFTDAEDRILWMAFEEYGLTEEVLDTVSESVGGTRQEIQDRYKSLKEKNMRRWDQQSEGSGNYESQIGISLEESLSTALDSFDNLFCRRCMQMFDCRLHGCSQPLIYPSEKQPVWFEHEEDRKPCSDQCYLRLKSEKISSDPSCLHENKTTTMEEEVLTLAPSGAEEPGKQGTATTLVEERCNSMNTTPFLTELAGCGGLNLNMPVAESRGKRKTINRSDIALCDLTLLSDDSQSSCKKQKKNTDIDAVTTINDNNRDLNVSACDEKCVAASECLSDSVDHTSNKSILSGSTCHGEHENVGDGPKDDMAEAEFSESSNFMNKHVEGMQRLSEWKPMEKELYLKGIEMFGRNSCLITRNLLSGLKTCMEVASYMHAGGASMPYRSNVPPSSLRNDNGKTDAECTDQEMPTRARLLRKRGKTRKFKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKQCPCLHNGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGDGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGPDQAPAWARKPESSRRDESAASQGRAKKHQSH 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3555 738 MobiDBLite consensus disorder prediction 327 346 - -
Prci3g3555 738 Pfam CXC domain 528 559 IPR041355 -
Prci3g3555 738 SMART sant 38 88 IPR001005 -
Prci3g3555 738 SMART sant 369 419 IPR001005 -
Prci3g3555 738 SUPERFAMILY SET domain 460 709 IPR046341 -
Prci3g3555 738 SMART set_7 589 710 IPR001214 GO:0005515
Prci3g3555 738 ProSiteProfiles CXC domain profile. 476 575 IPR026489 -
Prci3g3555 738 MobiDBLite consensus disorder prediction 711 738 - -
Prci3g3555 738 Gene3D SET domain 490 706 IPR046341 -
Prci3g3555 738 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 1 737 IPR045318 GO:0006338|GO:0042054
Prci3g3555 738 SMART CXC_2 524 561 IPR033467 -
Prci3g3555 738 Pfam SET domain 600 703 IPR001214 GO:0005515
Prci3g3555 738 CDD SET_EZH 589 705 - -
Prci3g3555 738 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 738 IPR025778 GO:0031519
Prci3g3555 738 MobiDBLite consensus disorder prediction 715 731 - -
Prci3g3555 738 FunFam Putative histone-lysine N-methyltransferase EZH2 490 706 - -
Prci3g3555 738 ProSiteProfiles SET domain profile. 589 704 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3555 Prci-Chr3 45246983 45253809 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3555 578 707 C2H2 Transcription Factor Family AT2G23740 26.531 3.96e-09 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci3g3555 SET 2.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3555 - - gmx:100808730 1101.66