Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3554 ATGGTGTCCAAAGCATCAGACTCTGCGATCAAACTAAGAAAATCACATGGAGAGCCAGCAAACGATGCTGTTGGAACCTTGTCAAGCAAGATTGATCATCTGGAAAAGCAAATCCAGGCGGAGAGAGTTGTATCAATTAAAGAAAAACTATTGAGGAATGGGAAGAAGGTACAATGCCATGTTTCCCAGATTGTCTCAGCAATAACAAGAAGGGATTCTTTTCTTACAAAGGAAACTATAATCAATCAAATGCTTTCTTCAAGAATTGACCACCCTCTATTTAAGTTCAATGCTTTCTCTCAAGGTTCTGGTGACAAAGATCACATCAACAGTCTAGAACTAGTTTTTACAACAAGTATCAAGATGCCTTATATTGAAAGATTACCGCCATACACATCTTGGATCTTTTTGGACAGAAATCAGAGAATGGCTGAAGATCAGTCTGTAGTTGGCAGAAGGCGTATCTACTATGACCAACATGGAAGTGAAGCATTGATATGCAGTGACAGTGAGGAAGAGCTAACGGAACCTGAGGAAGATAAGCATGAATTTACTGATGCTGAAGACCGAATTTTATGGATGGCGTTTGAGGAATATGGGTTAACTGAGGAAGTGTTGGATACTGTGAGCGAGTCTGTTGGAGGTACTAGACAGGAAATTCAGGATAGGTACAAAAGTCTCAAGGAAAAGAACATGAGGAGGTGGGACCAGCAGTCTGAAGGTTCTGGAAATTATGAATCTCAGATTGGTATAAGTTTGGAGGAAAGCCTGAGTACTGCTTTAGATTCTTTTGATAACCTTTTTTGTCGTCGATGCATGATGTTTGATTGTCGCTTGCATGGATGTTCTCAACCCCTAATATATCCTAGTGAAAAGCAGCCAGTTTGGTTTGAGCATGAAGAGGACAGGAAGCCATGCAGCGATCAGTGTTACCTAAGGTTAAAGTCTGAGAAAATTTCATCAGATCCTAGTTGTTTACATGAAAATAAAACCACAACTATGGAAGAGGAAGTATTGACTTTGGCACCCTCCGGTGCAGAAGAGCCAGGAAAGCAGGGCACTGCAACTACCTTGGTGGAAGAAAGATGCAATTCTATGAATACAACACCTTTTCTGACAGAACTTGCCGGTTGTGGAGGTCTCAACTTAAATATGCCTGTGGCAGAGAGTCGGGGGAAACGGAAGACCATAAATCGATCAGATATAGCACTGTGTGACTTAACATTGCTTTCTGATGATTCACAAAGTTCTTGTAAAAAGCAAAAGAAAAACACAGATATTGATGCAGTCACTACAATCAATGATAATAACAGAGACCTAAATGTCAGTGCATGTGATGAAAAATGTGTTGCTGCTTCTGAATGTTTGAGTGATTCTGTAGATCATACTTCTAACAAATCAATACTTTCTGGGAGCACTTGTCATGGTGAACATGAAAATGTTGGGGATGGACCTAAAGATGACATGGCTGAGGCAGAATTCAGTGAGTCATCCAATTTCATGAATAAGCATGTTGAAGGGATGCAAAGACTCTCAGAATGGAAACCTATGGAGAAAGAGCTATACTTGAAGGGAATAGAAATGTTTGGGAGAAACAGTTGCCTCATAACAAGGAACTTACTTTCTGGCCTTAAGACCTGCATGGAAGTAGCTAGTTACATGCATGCTGGTGGAGCATCAATGCCCTACAGATCTAATGTTCCACCAAGTTCACTCAGGAATGACAACGGAAAAACTGATGCAGAATGCACAGACCAAGAGATGCCAACAAGAGCGAGATTGCTACGGAAAAGGGGCAAAACAAGGAAATTTAAATATTCTTGGAAGTCTGCCGGCCACCCATCAATATGGAAAAGAATTGCGGATGGAAAAAACCAATCTTGCAAGCAATATACGCCCTGTGGATGTCAGTCAATGTGTGGAAAGCAATGTCCGTGCCTTCATAATGGAACTTGCTGTGAAAAATATTGTGGATGCTCCAAAAGCTGCAAAAATCGATTCAGAGGTTGTCACTGTGCTAAGAGTCAATGCAGAAGTCGACAATGTCCATGCTTTGCTGCTGGACGCGAATGTGATCCAGATGTTTGCCGAAACTGCTGGGTTAGCTGTGGGGATGGTTCATTGGGAGAACCACCTAGACGTGGAGATGGTCAATGTGGAAATATGAGGCTTCTTTTAAGGCAACAACAGAGGATTCTTTTGGCAAAGTCTGATGTTGCAGGATGGGGAGCATTCTTAAAGAACCCAGTTAACAAAAATGATTATCTAGGAGAATACACTGGGGAACTGATCTCCCACCGAGAAGCAGACAAGCGTGGAAAAATATATGATCGTGCGAACTCATCATTCCTTTTTGACTTGAATGATCAGTATGTTCTGGATGCTTATCGCAAAGGAGACAAACTAAAATTTGCCAACCACTCATCAAATCCAAACTGCTATGCAAAGGTGATGCTGGTTGCTGGGGATCATCGAGTTGGCATCTTTGCCAAGGAACACATCGAAGCTAGTGAGGAGCTGTTCTATGATTATCGTTATGGTCCAGATCAAGCACCCGCTTGGGCTCGTAAACCTGAGTCTTCAAGGAGAGATGAATCAGCAGCTTCTCAAGGCAGGGCCAAGAAACACCAGTCTCATTGA 2640 0.4197 MVSKASDSAIKLRKSHGEPANDAVGTLSSKIDHLEKQIQAERVVSIKEKLLRNGKKVQCHVSQIVSAITRRDSFLTKETIINQMLSSRIDHPLFKFNAFSQGSGDKDHINSLELVFTTSIKMPYIERLPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEELTEPEEDKHEFTDAEDRILWMAFEEYGLTEEVLDTVSESVGGTRQEIQDRYKSLKEKNMRRWDQQSEGSGNYESQIGISLEESLSTALDSFDNLFCRRCMMFDCRLHGCSQPLIYPSEKQPVWFEHEEDRKPCSDQCYLRLKSEKISSDPSCLHENKTTTMEEEVLTLAPSGAEEPGKQGTATTLVEERCNSMNTTPFLTELAGCGGLNLNMPVAESRGKRKTINRSDIALCDLTLLSDDSQSSCKKQKKNTDIDAVTTINDNNRDLNVSACDEKCVAASECLSDSVDHTSNKSILSGSTCHGEHENVGDGPKDDMAEAEFSESSNFMNKHVEGMQRLSEWKPMEKELYLKGIEMFGRNSCLITRNLLSGLKTCMEVASYMHAGGASMPYRSNVPPSSLRNDNGKTDAECTDQEMPTRARLLRKRGKTRKFKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKQCPCLHNGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGDGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGPDQAPAWARKPESSRRDESAASQGRAKKHQSH 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3554 879 Pfam SET domain 741 844 IPR001214 GO:0005515
Prci3g3554 879 ProSiteProfiles SET domain profile. 730 845 IPR001214 GO:0005515
Prci3g3554 879 Pfam CXC domain 669 700 IPR041355 -
Prci3g3554 879 Gene3D SET domain 631 847 IPR046341 -
Prci3g3554 879 SMART sant 180 230 IPR001005 -
Prci3g3554 879 SMART sant 510 560 IPR001005 -
Prci3g3554 879 SMART set_7 730 851 IPR001214 GO:0005515
Prci3g3554 879 FunFam Putative histone-lysine N-methyltransferase EZH2 631 847 - -
Prci3g3554 879 SMART CXC_2 665 702 IPR033467 -
Prci3g3554 879 ProSiteProfiles CXC domain profile. 617 716 IPR026489 -
Prci3g3554 879 MobiDBLite consensus disorder prediction 468 487 - -
Prci3g3554 879 MobiDBLite consensus disorder prediction 1 24 - -
Prci3g3554 879 CDD SET_EZH 730 846 - -
Prci3g3554 879 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 24 878 IPR045318 GO:0006338|GO:0042054
Prci3g3554 879 MobiDBLite consensus disorder prediction 856 872 - -
Prci3g3554 879 MobiDBLite consensus disorder prediction 852 879 - -
Prci3g3554 879 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 879 IPR025778 GO:0031519
Prci3g3554 879 SUPERFAMILY SET domain 601 850 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3554 Prci-Chr3 45246983 45255279 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3554 719 848 C2H2 Transcription Factor Family AT2G23740 26.531 3.58e-09 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci3g3554 SET 3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3554 - - gmx:100808730 1271.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g3554 3 45246983 45255279 Prci3g3554 3 45246983 45255279 ECH