Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3553 ATGGTGTCCAAAGCATCAGACTCTGCGATCAAACTAAGAAAATCACATGGAGAGCCAGCAAACGATGCTGTTGGAACCTTGTCAAGCAAGATTGATCATCTGGAAAAGCAAATCCAGGCGGAGAGAGTTGTATCAATTAAAGAAAAACTATTGAGGAATGGGAAGAAGGTACAATGCCATGTTTCCCAGATTGTCTCAGCAATAACAAGAAGGGATTCTTTTCTTACAAAGGAAACTATAATCAATCAAATGCTTTCTTCAAGAATTGACCACCCTCTATTTAAGTTCAATGCTTTCTCTCAAGGTTCTGGTGACAAAGATCACATCAACAGTCTAGAACTAGTTTTTACAACAAGTATCAAGATGCCTTATATTGAAAGATTACCGCCATACACATCTTGGATCTTTTTGGACAGAAATCAGAGAATGGCTGAAGATCAGTCTGTAGTTGGCAGAAGGCGTATCTACTATGACCAACATGGAAGTGAAGCATTGATATGCAGTGACAGTGAGGAAGAGCTAACGGAACCTGAGGAAGATAAGCATGAATTTACTGATGCTGAAGACCGAATTTTATGGATGGCGTTTGAGGAATATGGGTTAACTGAGGAAGTGTTGGATACTGTGAGCGAGTCTGTTGGAGGTACTAGACAGGAAATTCAGGATAGGTACAAAAGTCTCAAGGAAAAGAACATGAGGAGGTGGGACCAGCAGTCTGAAGGTTCTGGAAATTATGAATCTCAGATTGGTATAAGTTTGGAGGAAAGCCTGAGTACTGCTTTAGATTCTTTTGATAACCTTTTTTGTCGTCGATGCATGCAGATGTTTGATTGTCGCTTGCATGGATGTTCTCAACCCCTAATATATCCTAGTGAAAAGCAGCCAGTTTGGTTTGAGCATGAAGAGGACAGGAAGCCATGCAGCGATCAGTGTTACCTAAGGTTAAAGTCTGAGAAAATTTCATCAGATCCTAGTTGTTTACATGAAAATAAAACCACAACTATGGAAGAGGAAGTATTGACTTTGGCACCCTCCGGTGCAGAAGAGCCAGGAAAGCAGGGCACTGCAACTACCTTGGTGGAAGAAAGATGCAATTCTATGAATACAACACCTTTTCTGACAGAACTTGCCGGTTGTGGAGGTCTCAACTTAAATATGCCTGTGGCAGAGAGTCGGGGGAAACGGAAGACCATAAATCGATCAGATATAGCACTGTGTGACTTAACATTGCTTTCTGATGATTCACAAAGTTCTTGTAAAAAGCAAAAGAAAAACACAGATATTGATGCAGTCACTACAATCAATGATAATAACAGAGACCTAAATGTCAGTGCATGTGATGAAAAATGTGTTGCTGCTTCTGAATGTTTGAGTGATTCTGTAGATCATACTTCTAACAAATCAATACTTTCTGGGAGCACTTGTCATGGTGAACATGAAAATGTTGGGGATGGACCTAAAGATGACATGGCTGAGGCAGAATTCAGTGAGTCATCCAATTTCATGAATAAGCATGTTGAAGGGATGCAAAGACTCTCAGAATGGAAACCTATGGAGAAAGAGCTATACTTGAAGGGAATAGAAATGTTTGGGAGAAACAGTTGCCTCATAACAAGGAACTTACTTTCTGGCCTTAAGACCTGCATGGAAGTAGCTAGTTACATGCATGCTGGTGGAGCATCAATGCCCTACAGATCTAATGTTCCACCAAGTTCACTCAGGAATGACAACGGAAAAACTGATGCAGAATGCACAGACCAAGAGATGCCAACAAGAGCGAGATTGCTACGGAAAAGGGGCAAAACAAGGAAATTTAAATATTCTTGGAAGTCTGCCGGCCACCCATCAATATGGAAAAGAATTGCGGATGGAAAAAACCAATCTTGCAAGCAATATACGCCCTGTGGATGTCAGTCAATGTGTGGAAAGCAATGTCCGTGCCTTCATAATGGAACTTGCTGTGAAAAATATTGTGGATGCTCCAAAAGCTGCAAAAATCGATTCAGAGGTTGTCACTGTGCTAAGAGTCAATGCAGAAGTCGACAATGTCCATGCTTTGCTGCTGGACGCGAATGTGATCCAGATGTTTGCCGAAACTGCTGGGTTAGCTGTGGGGATGGTTCATTGGGAGAACCACCTAGACGTGGAGATGGTCAATGTGGAAATATGAGGCTTCTTTTAAGGCAACAACAGAGGATTCTTTTGGCAAAGTCTGATGTTGCAGGATGGGGAGCATTCTTAAAGAACCCAGTTAACAAAAATGATTATCTAGGAGAATACACTGGGGAACTGATCTCCCACCGAGAAGCAGACAAGCGTGGAAAAATATATGATCGTGCGAACTCATCATTCCTTTTTGACTTGAATGATCAGTATGTTCTGGATGCTTATCGCAAAGGAGACAAACTAAAATTTGCCAACCACTCATCAAATCCAAACTGCTATGCAAAGGTGATGCTGGTTGCTGGGGATCATCGAGTTGGCATCTTTGCCAAGGAACACATCGAAGCTAGTGAGGAGCTGTTCTATGATTATCGTTATGGTCCAGATCAAGCACCCGCTTGGGCTCGTAAACCTGAGTCTTCAAGGAGAGATGAATCAGCAGCTTCTCAAGGCAGGGCCAAGAAACACCAGTCTCATTGA 2643 0.42 MVSKASDSAIKLRKSHGEPANDAVGTLSSKIDHLEKQIQAERVVSIKEKLLRNGKKVQCHVSQIVSAITRRDSFLTKETIINQMLSSRIDHPLFKFNAFSQGSGDKDHINSLELVFTTSIKMPYIERLPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEELTEPEEDKHEFTDAEDRILWMAFEEYGLTEEVLDTVSESVGGTRQEIQDRYKSLKEKNMRRWDQQSEGSGNYESQIGISLEESLSTALDSFDNLFCRRCMQMFDCRLHGCSQPLIYPSEKQPVWFEHEEDRKPCSDQCYLRLKSEKISSDPSCLHENKTTTMEEEVLTLAPSGAEEPGKQGTATTLVEERCNSMNTTPFLTELAGCGGLNLNMPVAESRGKRKTINRSDIALCDLTLLSDDSQSSCKKQKKNTDIDAVTTINDNNRDLNVSACDEKCVAASECLSDSVDHTSNKSILSGSTCHGEHENVGDGPKDDMAEAEFSESSNFMNKHVEGMQRLSEWKPMEKELYLKGIEMFGRNSCLITRNLLSGLKTCMEVASYMHAGGASMPYRSNVPPSSLRNDNGKTDAECTDQEMPTRARLLRKRGKTRKFKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKQCPCLHNGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGDGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGPDQAPAWARKPESSRRDESAASQGRAKKHQSH 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3553 880 SMART sant 511 561 IPR001005 -
Prci3g3553 880 SMART sant 180 230 IPR001005 -
Prci3g3553 880 ProSiteProfiles CXC domain profile. 618 717 IPR026489 -
Prci3g3553 880 Pfam SET domain 742 845 IPR001214 GO:0005515
Prci3g3553 880 CDD SET_EZH 731 847 - -
Prci3g3553 880 MobiDBLite consensus disorder prediction 1 24 - -
Prci3g3553 880 MobiDBLite consensus disorder prediction 857 873 - -
Prci3g3553 880 MobiDBLite consensus disorder prediction 853 880 - -
Prci3g3553 880 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 24 879 IPR045318 GO:0006338|GO:0042054
Prci3g3553 880 ProSiteProfiles SET domain profile. 731 846 IPR001214 GO:0005515
Prci3g3553 880 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 880 IPR025778 GO:0031519
Prci3g3553 880 MobiDBLite consensus disorder prediction 469 488 - -
Prci3g3553 880 Pfam CXC domain 670 701 IPR041355 -
Prci3g3553 880 Gene3D SET domain 632 848 IPR046341 -
Prci3g3553 880 FunFam Putative histone-lysine N-methyltransferase EZH2 632 848 - -
Prci3g3553 880 SMART CXC_2 666 703 IPR033467 -
Prci3g3553 880 SMART set_7 731 852 IPR001214 GO:0005515
Prci3g3553 880 SUPERFAMILY SET domain 602 851 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3553 Prci-Chr3 45246983 45255280 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3553 720 849 C2H2 Transcription Factor Family AT2G23740 26.531 3.41e-09 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci3g3553 SET 3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3553 - - gmx:100808730 1266.91