Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3547 ATGGCCTCGATTCAACGCACTGCAAGCTCGGGATCCGAAGGGGTAGACCCGCGATATAGCGACTTTGATGAGAGAAAGAGAAAGAGGATGCTGTCCAACCGTGAGTCGGCACGACGATCCCGGATGAAGAAGCAAAAGCAACTCGAAGATCTTGCAAGCGAAATCGGCCGACTAAAAAATGAAAACAGTCAGCTGTTTCAGAGCATAAAGGCCAAGGAGGAAGCATACGCTGAGATCGAATCCGTTAACAATGTCTTGAGGGCTCAGACTAAGGAGCTGACCGATCGATTGCGTTTTCTCAACTCGATCCTTGAGATTGCTGAAGAGGTCTGTGGGCTTTCTGTTGAAATCCCTGAGATACCGGATGCTCTCTTGAACCCATGGCAGCTTCCCCTTCCAATGCAGTCGATCATGGCGTCCGCGGTCGACATGATAATGCATTGA 444 0.5 MASIQRTASSGSEGVDPRYSDFDERKRKRMLSNRESARRSRMKKQKQLEDLASEIGRLKNENSQLFQSIKAKEEAYAEIESVNNVLRAQTKELTDRLRFLNSILEIAEEVCGLSVEIPEIPDALLNPWQLPLPMQSIMASAVDMIMH 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3547 147 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 28 43 IPR004827 GO:0003700|GO:0006355
Prci3g3547 147 PANTHER BZIP TRANSCRIPTION FACTOR 44 6 144 - -
Prci3g3547 147 SMART brlzneu 21 85 IPR004827 GO:0003700|GO:0006355
Prci3g3547 147 Pfam Basic region leucine zipper 23 71 IPR004827 GO:0003700|GO:0006355
Prci3g3547 147 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 23 86 IPR004827 GO:0003700|GO:0006355
Prci3g3547 147 CDD bZIP_plant_GBF1 26 77 IPR045314 GO:0003700|GO:0006355
Prci3g3547 147 Gene3D - 23 76 - -
Prci3g3547 147 SUPERFAMILY Leucine zipper domain 25 79 IPR046347 GO:0003700|GO:0006355
Prci3g3547 147 FunFam BZIP transcription factor 23 74 - -
Prci3g3547 147 Coils Coil 34 92 - -
Prci3g3547 147 MobiDBLite consensus disorder prediction 1 46 - -
Prci3g3547 147 MobiDBLite consensus disorder prediction 17 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3547 Prci-Chr3 45213823 45215000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3547 1 141 bZIP Transcription Factor Family AT3G62420 58.451 1.18e-53 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci3g3547 bZIP_2 1.4e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3547 K25786 - jre:108981706 189.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4111 1 56173932 56175218 Prci3g3547 3 45213823 45215000 CCT