Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3539 ATGAGGAAGAATTCGAGAGCTCAACAAGCTTTGAGGCTCCCTGTGCTTGTTCTGGGACCGTCAAGTTTGCTCACAGAGATTGCATACAGAGATGGTGCAATGAGAAAGGGAATACAATCTGTGAAATATGCCTCCAGTTTGACTTTTTGTTCGCAGCAATATGAACCTGGCTACACAGCTCCTCCAAAGAAATTGCAGATAAATGATGAAGCAATGACCATCCGAGATAGCCTGCAAGTTGCAAGAATGGATGAAGAAGCGCTTAATGCAAGATTAGAGGCAATAGTTGAAAGAGTGACAATAGAAAGTGATTACTCTGAATGCACGTCTGCCGCAGATAGAAGTGCATCTTACTGTCGATTCCTGGCCTTGGCATTCACACTCTTTATGCTCGTGAGACATCTTTTCGCCGTGCTTACAAGTGGAGTAGAAGATTACCCATTTACACTTCTTACTGTTTTAATGCTAAGGGCTGGCGGAATTGTTCTACCCATGTTCATGATTATTAGGATGATCGGAGCGCTTCAAAACATCGTCCAGCGCCAGCATCAGGATTCTGAAGGTGGCGCAGCAATATCTGACGGACACAACAACGAAAACGGGCCACTGCGTGATGTGATTTTTAGACACACATAG 636 0.445 MRKNSRAQQALRLPVLVLGPSSLLTEIAYRDGAMRKGIQSVKYASSLTFCSQQYEPGYTAPPKKLQINDEAMTIRDSLQVARMDEEALNARLEAIVERVTIESDYSECTSAADRSASYCRFLALAFTLFMLVRHLFAVLTSGVEDYPFTLLTVLMLRAGGIVLPMFMIIRMIGALQNIVQRQHQDSEGGAAISDGHNNENGPLRDVIFRHT 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3539 211 Pfam Protein of unknown function (DUF3675) 56 172 IPR022143 -
Prci3g3539 211 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 50 183 IPR033275 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3539 Prci-Chr3 45168110 45170464 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3539 - - gmx:100797029 194.126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4104 1 56058384 56060983 Prci3g3539 3 45168110 45170464 CCT
Prci3g3539 3 45168110 45170464 Prci3g3539 3 45168110 45170464 ECH