Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3529 ATGGCGCTTCGAAGAGAAAAGCTTCTGTTCTTGTTATGTGTTCTGTGCTATACTGTAAACGTCATTGCCGGAAAGAGCTACTACGATGTACTTCAAGTGTCGAAGGGTGCTTCCGACGAGCAGATAAAGAGGGCTTACAGGAAGCTGGCGTTGAAGTATCATCCCGATAAGAATCAGGGCAACGAAGAAGCTAATAAGAGATTTGCTGAGATCAACAATGCGTATGAAGTATTGTCGGATAGCGAGAAGAGAAGTATTTATGACAGGTACGGTGAAGAGGGTTTGAAACAGCATGCTGCTAGTGGGGGCCGAGGCGGTGGCGGAATGGGAATGCACTTCCAAGACATTTTCAGCACTTTCTTTGGTGGAGGTTCAATGGAGGAGGAAGAGAGAATTGTAAAAGGTGATGATGTCATTGTTGAATTGGATGCAACCCTGGAAGATTTGTACATGGGAGGTTCCTTGAAGGCTTGGAGAGAAAAGAATGTTTTAAAGCCAGCACCTGGGAAGAGGCGTTGTAACTGTAGAAATGAGGTTTACCACAAGCAAATTGGTCCTGGAATGTTTCAACAGATGACAGAGCAGGTCTGTGAGCAATGTCCTAATGTCAAGTATGAAAGGGAGGGGTATTTCATCACTGTTGATATTGAGAAAGGCATGCAAGATGGGCAGGAAGTGTTATTTTATGAAGATGGAGAGCCGATGATTGATGGCGAATGTGGAGATTTAAGATTCCGCATCCGTACAGCACCCCATGATGTCTTCAGAAGGGAAGGGAATGACTTGCACGCCACTGTTACTATAAACCTGGTTCAAGCTCTTGTAGGTTTTGAGAAGACCATTAAACACCTGGATGAGCATATGGTGGACATCAGTTCGAAGAAAATCACGAACCCAAAGGAAGTGAGGAAGTTCAAAGAAGAGGGCATGCCGTTCCATATGAGCACGAAGAAAGGGGACCTTTCCGTAACTTTTGAGGTTTTGTTCCCCACGTCACTTACGGAGGAGCAGAAAACGAAGATGAAAGCAATTCTTGGTTAG 1041 0.4486 MALRREKLLFLLCVLCYTVNVIAGKSYYDVLQVSKGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSEKRSIYDRYGEEGLKQHAASGGRGGGGMGMHFQDIFSTFFGGGSMEEEERIVKGDDVIVELDATLEDLYMGGSLKAWREKNVLKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCEQCPNVKYEREGYFITVDIEKGMQDGQEVLFYEDGEPMIDGECGDLRFRIRTAPHDVFRREGNDLHATVTINLVQALVGFEKTIKHLDEHMVDISSKKITNPKEVRKFKEEGMPFHMSTKKGDLSVTFEVLFPTSLTEEQKTKMKAILG 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3529 346 Gene3D DnaJ domain 23 129 IPR036869 -
Prci3g3529 346 SUPERFAMILY HSP40/DnaJ peptide-binding domain 254 339 IPR008971 GO:0006457|GO:0051082
Prci3g3529 346 PRINTS DnaJ domain signature 63 83 IPR001623 -
Prci3g3529 346 PRINTS DnaJ domain signature 46 61 IPR001623 -
Prci3g3529 346 PRINTS DnaJ domain signature 28 46 IPR001623 -
Prci3g3529 346 PRINTS DnaJ domain signature 83 102 IPR001623 -
Prci3g3529 346 SUPERFAMILY HSP40/DnaJ peptide-binding domain 133 255 IPR008971 GO:0006457|GO:0051082
Prci3g3529 346 Pfam DnaJ C terminal domain 140 330 IPR002939 -
Prci3g3529 346 Gene3D - 252 330 - -
Prci3g3529 346 Coils Coil 61 81 - -
Prci3g3529 346 FunFam DnaJ protein ERDJ3B 23 130 - -
Prci3g3529 346 CDD DnaJ_C 136 333 - -
Prci3g3529 346 ProSitePatterns Nt-dnaJ domain signature. 68 87 IPR018253 -
Prci3g3529 346 SMART dnaj_3 25 83 IPR001623 -
Prci3g3529 346 Pfam DnaJ domain 27 88 IPR001623 -
Prci3g3529 346 SUPERFAMILY Chaperone J-domain 22 124 IPR036869 -
Prci3g3529 346 Gene3D - 130 251 - -
Prci3g3529 346 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 11 6 345 - -
Prci3g3529 346 CDD DnaJ 27 80 IPR001623 -
Prci3g3529 346 ProSiteProfiles dnaJ domain profile. 26 91 IPR001623 -
Prci3g3529 346 FunFam DnaJ subfamily B member 11 251 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3529 Prci-Chr3 45085226 45089855 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3529 27 90 C2H2 Transcription Factor Family AT1G74250 43.478 1.10e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3529 K09517 - rvl:131304873 614.764