Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3528 ATGTGTTCTGTGCTATACTGTAAACGTCATTGCCGGGTATTCTTTCTGTTTTCTCCCATCAACAATGCATACATTTGGCACTACTCCTTTGCTTATTCGACCGGTTGCAGAAAGAGCTACTACGATGTACTTCAAGTGTCGAAGGGTGCTTCCGACGAGCAGATAAAGAGGGCTTACAGGAAGCTGGCGTTGAAGTATCATCCCGATAAGAATCAGGGCAACGAAGAAGCTAATAAGAGATTTGCTGAGATCAACAATGCGTATGAAGTATTGTCGGATAGCGAGAAGAGAAGTATTTATGACAGGTACGGTGAAGAGGGTTTGAAACAGCATGCTGCTAGTGGGGGCCGAGGCGGTGGCGGAATGGGAATGCACTTCCAAGACATTTTCAGCACTTTCTTTGGTGGAGGTTCAATGGAGGAGGAAGAGAGAATTGTAAAAGGTGATGATGTCATTGTTGAATTGGATGCAACCCTGGAAGATTTGTACATGGGAGGTTCCTTGAAGGCTTGGAGAGAAAAGAATGTTTTAAAGCCAGCACCTGGGAAGAGGCGTTGTAACTGTAGAAATGAGGTTTACCACAAGCAAATTGGTCCTGGAATGTTTCAACAGATGACAGAGCAGGTCTGTGAGCAATGTCCTAATGTCAAGTATGAAAGGGAGGGGTATTTCATCACTGTTGATATTGAGAAAGGCATGCAAGATGGGCAGGAAGTGTTATTTTATGAAGATGGAGAGCCGATGATTGATGGCGAATGTGGAGATTTAAGATTCCGCATCCGTACAGCACCCCATGATGTCTTCAGAAGGGAAGGGAATGACTTGCACGCCACTGTTACTATAAACCTGGTTCAAGCTCTTGTAGGTTTTGAGAAGACCATTAAACACCTGGATGAGCATATGGTGGACATCAGTTCGAAGAAAATCACGAACCCAAAGGAAGTGAGGAAGTTCAAAGAAGAGGGCATGCCGTTCCATATGAGCACGAAGAAAGGGGACCTTTCCGTAACTTTTGAGGTTTTGTTCCCCACGTCACTTACGGAGGAGCAGAAAACGAAGATGAAAGCAATTCTTGGTTAG 1080 0.4472 MCSVLYCKRHCRVFFLFSPINNAYIWHYSFAYSTGCRKSYYDVLQVSKGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSEKRSIYDRYGEEGLKQHAASGGRGGGGMGMHFQDIFSTFFGGGSMEEEERIVKGDDVIVELDATLEDLYMGGSLKAWREKNVLKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCEQCPNVKYEREGYFITVDIEKGMQDGQEVLFYEDGEPMIDGECGDLRFRIRTAPHDVFRREGNDLHATVTINLVQALVGFEKTIKHLDEHMVDISSKKITNPKEVRKFKEEGMPFHMSTKKGDLSVTFEVLFPTSLTEEQKTKMKAILG 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3528 359 CDD DnaJ_C 149 346 - -
Prci3g3528 359 FunFam DnaJ protein ERDJ3B 36 143 - -
Prci3g3528 359 CDD DnaJ 40 93 IPR001623 -
Prci3g3528 359 Gene3D - 143 264 - -
Prci3g3528 359 FunFam DnaJ subfamily B member 11 264 359 - -
Prci3g3528 359 Pfam DnaJ domain 40 101 IPR001623 -
Prci3g3528 359 Pfam DnaJ C terminal domain 153 343 IPR002939 -
Prci3g3528 359 SUPERFAMILY HSP40/DnaJ peptide-binding domain 146 268 IPR008971 GO:0006457|GO:0051082
Prci3g3528 359 SMART dnaj_3 38 96 IPR001623 -
Prci3g3528 359 Gene3D DnaJ domain 36 142 IPR036869 -
Prci3g3528 359 ProSiteProfiles dnaJ domain profile. 39 104 IPR001623 -
Prci3g3528 359 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 11 30 358 - -
Prci3g3528 359 SUPERFAMILY HSP40/DnaJ peptide-binding domain 267 352 IPR008971 GO:0006457|GO:0051082
Prci3g3528 359 PRINTS DnaJ domain signature 59 74 IPR001623 -
Prci3g3528 359 PRINTS DnaJ domain signature 96 115 IPR001623 -
Prci3g3528 359 PRINTS DnaJ domain signature 41 59 IPR001623 -
Prci3g3528 359 PRINTS DnaJ domain signature 76 96 IPR001623 -
Prci3g3528 359 ProSitePatterns Nt-dnaJ domain signature. 81 100 IPR018253 -
Prci3g3528 359 Coils Coil 74 94 - -
Prci3g3528 359 Gene3D - 265 343 - -
Prci3g3528 359 SUPERFAMILY Chaperone J-domain 38 137 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3528 Prci-Chr3 45085225 45089855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3528 33 103 C2H2 Transcription Factor Family AT1G74250 40.789 1.16e-09 57.8