Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3506 ATGGCAGCGGAGGGAACATTGTCGTTTTCGGTGGCATCGGTGGTGGAAGATGTGCTTCAGCAGCACGGCACTCGGCTCAAAGATCTTGATTTAGAATCTAGGAAAGCAGAGGAAGCTGCATCAAGAAGATACGAAGCAGCAGGGTGGCTGAGAAAAATGGTTGGAGTTGTTGCGGCTAAAGATTTACCAGCAGAGCCCTCTGAGGAAGAGTTTAGACTTGGTTTGAGAAGTGGGATTATCCTCTGCAATGTCATTAATAAGGTTCAACCTGGAGCTGTGCCTAAGGTTGTGGAAAGTCCTGTTGATTCTGCGATGATCCCAGATGGAGCACCATTGTCGGCATTTCAATATTTTGAAAACGTGAGGAACTTCCTTGTGGCTATCCAAGAAATCGGACTTCCTACCTTCGAGGCATCTGATCTGGAACAGGGGGGGAAATCAGCTCGGATTGTGAACTGCGTTTTGGGCCTTAAATCCTATAGTGAATGGAAACAGACAGGGGCAAATGGAACATGGAAGTTTGGTGGAACTGTTAAGGCCACAACTTCTGGAAAATCTTTTGTAAGAAAAAATTCAGAGCCCTTTACTAACTCGTTGTCAAGGAACTCATCCATCAATGAAAAATCCGTGACTTCTCCCTCTGACGTTGATTCTAGTAAAATGTCTGGCTCTCATTCTTTGAGTTCGCTCGTTCATGCAATTCTGTCTGATAAGAAACCTGACGAAGTCCCAATGTTGGTTGAATCTGTTTTAAACAAAGTTGTAGAGGAGTTTGAGCATCGGATTGCACGCCAAGGTGAACAGACTAAAACAGCGCCAAGAGATAGTGTTTCTCATGGCAACCGACCTATATCAAAGTTTGTGGTGGGAGATAAAAAGGTAGAGAACAAGATTCCAATGGTTATAAGCAAAAAGGATGTGATTCATGGAAACTGTGCTGCTGAAGAAAAATTGCAAAACCAACTTCTGAAACAACAAATACTCTTTGATCAGCAGCAAAGGCATATTCAAGAACTAAAGCATACCCTTCACACCACAGAAGCCGGTTTGCGGTTTATGCAAATGAAATTTCACGAGGAGTTTTCAAACCTTGGAATGCATATTCATGGGTTGGCTCATGCTGCTTCTGGATACCACACAGTTCTTGAAGAAAATCGTAGACTATATAATCAAGTCCAGGATCTCAAGGGAAGTATTAGGGTGTATTGTCGAGTAAGACCCTTCTTACCTGGACAATCAAGCTATTTGAGCACAGTGGAAAGTATGGAAGAGGGAAATATCACAATCAATATTCCATCAAAGAACGGAAAGGGGCGCAAAACATTCAACTTCAACAAAATCTTTGGGCCATCCGCAACCCAAGCGGAGGTCTTCTCTGATATGCAGCCACTCATTAGGTCTGTACTTGACGGTTATAATGTTTGCATATTTGCATATGGCCAAACAGGATCAGGAAAAACTTACACTATGACTGGGCCGAAAGAGATAACAGAGAAAAGTCAAGGTGTAAATTACAGAGCTCTAAGCGATTTGTTTCATATAGCAGATCAACGAAAGGACGCTTTTCGCTATGATGTGGCTGTTCAAATGATTGAGATTTATAATGAGCGAGTCAGAGATCTTCTGGTTACTGATGGATCAAATAGAAGATTAGAAATTCGAAGTAGTTCTCATAAAGGGTTGAGCGTGCCAGATGCAAGCCTTGTCTCTGTATCATCAACGCTTGATGTTATTGATCTAATGAACCTGGGGCAAAGGAATCGTGCAGTTGGAGCAACAGCCCTTAATGACCGTAGCAGCCGCTCTCATAGTTGCTTGACTGTTCATGTTCAAGGAAGAGACTTGACATCTGGTACCATCCTTCGTGGATGCATGCATCTGGTTGACTTGGCTGGAAGTGAGAGGGTAGACAAATCTGAGGCCACGGGAGATAGACTCAAGGAGGCACAGCATATTAATAGATCTCTCTCAGCTTTGGGTGATGTCATCGCATCACTCGCTCAGAAAAATCCACATGTCCCATACAGAAACAGCAAACTCACACAGTTACTCCAAGATTCACTTGGGGGACAAGCCAAAACACTAATGTTTGTTCACATAAGTCCAGAGTCTGATGCCATTGGAGAAACAATTAGCACCTTAAAATTTGCAGAAAGAGTTTCTACAGTTGAGCTTGGCGCTGCTCGAGTAAACAAAGATAGTGCAGATGTAAAAGAACTCAAAGAACAGTTTGCCATCCTTAAGGCGGCCTTGGCAAGGAAGGAAGGGGAATCAGAGCAGGTTGTACATTCATTTTCTGGCAGCAACGAAAAGTACAGAACAAAGGCTGGTGACCTATCACCTTATCCTATAAGCCAGCGGTGTGCAGATGTAATGGGTGATGATCGCCTTGGATGCCGACAACCAATGGTTGATGAAGGTAGCATAGGGCTTCACAGTAACACCAGGAGGCAAAAAACACACAGCCTTGATTTTGACGAGATATCTGCAAATTCACCACCTTGGCCCCCAGTGAAGAGTCCTGGTCAAAACCACGGGGAAGATGATAAAGAAATTGGACAGGGCGAGTGGGTCGATAAGGTGATGGTAAACAAGCAAGATGTAAGCAAATTTGGGATCCCCTTGAGGGGTTGGGAAGCAGACAACGGACAGTTATCAGAGGCCTTTTATCAGAAATATCTGCAGGATTCTTCAATAGTATGCACAGAACGATCATTTAATATGCTTATGGGAGGCAGTCAGTTCAACCTTGCTGGTTCAGATGACATGGATGATCTTGACGCTGTAACCAGTGATTCCTCGGAACCTGACTTACTTTGGCAATATAATCATTCCAAACTTGCCACAGTGCCCAATGGAATTGGCTCAAAGACCAAGAGGTCGATGTCCAAGACACCAAAAAGCCCCGAATTGAGCAAGAATGTGAATTCTTCGCTAGTCCCCTCGCCTTCTCGGAAACAGCCAAATGGAGTCTTGAATCGAACCGGAAGGAATCCGGCTCCTGTTGATATGAAACGGAAAAATGGAAATAGGAAGTGA 3039 0.439 MAAEGTLSFSVASVVEDVLQQHGTRLKDLDLESRKAEEAASRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVINKVQPGAVPKVVESPVDSAMIPDGAPLSAFQYFENVRNFLVAIQEIGLPTFEASDLEQGGKSARIVNCVLGLKSYSEWKQTGANGTWKFGGTVKATTSGKSFVRKNSEPFTNSLSRNSSINEKSVTSPSDVDSSKMSGSHSLSSLVHAILSDKKPDEVPMLVESVLNKVVEEFEHRIARQGEQTKTAPRDSVSHGNRPISKFVVGDKKVENKIPMVISKKDVIHGNCAAEEKLQNQLLKQQILFDQQQRHIQELKHTLHTTEAGLRFMQMKFHEEFSNLGMHIHGLAHAASGYHTVLEENRRLYNQVQDLKGSIRVYCRVRPFLPGQSSYLSTVESMEEGNITINIPSKNGKGRKTFNFNKIFGPSATQAEVFSDMQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPKEITEKSQGVNYRALSDLFHIADQRKDAFRYDVAVQMIEIYNERVRDLLVTDGSNRRLEIRSSSHKGLSVPDASLVSVSSTLDVIDLMNLGQRNRAVGATALNDRSSRSHSCLTVHVQGRDLTSGTILRGCMHLVDLAGSERVDKSEATGDRLKEAQHINRSLSALGDVIASLAQKNPHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPESDAIGETISTLKFAERVSTVELGAARVNKDSADVKELKEQFAILKAALARKEGESEQVVHSFSGSNEKYRTKAGDLSPYPISQRCADVMGDDRLGCRQPMVDEGSIGLHSNTRRQKTHSLDFDEISANSPPWPPVKSPGQNHGEDDKEIGQGEWVDKVMVNKQDVSKFGIPLRGWEADNGQLSEAFYQKYLQDSSIVCTERSFNMLMGGSQFNLAGSDDMDDLDAVTSDSSEPDLLWQYNHSKLATVPNGIGSKTKRSMSKTPKSPELSKNVNSSLVPSPSRKQPNGVLNRTGRNPAPVDMKRKNGNRK 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3506 1012 Pfam Calponin homology (CH) domain 41 161 IPR001715 GO:0005515
Prci3g3506 1012 Gene3D Kinesin motor domain 393 764 IPR036961 -
Prci3g3506 1012 PRINTS Kinesin heavy chain signature 673 694 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci3g3506 1012 PRINTS Kinesin heavy chain signature 471 492 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci3g3506 1012 PRINTS Kinesin heavy chain signature 593 610 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci3g3506 1012 PRINTS Kinesin heavy chain signature 624 642 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci3g3506 1012 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Prci3g3506 1012 PANTHER KINESIN-LIKE PROTEIN KLP-3 47 927 IPR027640 GO:0003777|GO:0007018
Prci3g3506 1012 Coils Coil 737 757 - -
Prci3g3506 1012 FunFam Kinesin-like protein KIN-14I isoform A 393 765 - -
Prci3g3506 1012 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 398 759 IPR027417 -
Prci3g3506 1012 SMART ch_5 42 160 IPR001715 GO:0005515
Prci3g3506 1012 SUPERFAMILY Calponin-homology domain, CH-domain 38 173 IPR036872 -
Prci3g3506 1012 CDD KISc_C_terminal 396 725 - -
Prci3g3506 1012 MobiDBLite consensus disorder prediction 950 994 - -
Prci3g3506 1012 FunFam Kinesin-like protein KIN-14I isoform A 27 179 - -
Prci3g3506 1012 CDD CH_AtKIN14-like 42 159 - -
Prci3g3506 1012 Pfam Kinesin motor domain 404 722 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci3g3506 1012 SMART kinesin_4 396 731 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci3g3506 1012 MobiDBLite consensus disorder prediction 950 1012 - -
Prci3g3506 1012 Coils Coil 19 39 - -
Prci3g3506 1012 MobiDBLite consensus disorder prediction 189 223 - -
Prci3g3506 1012 MobiDBLite consensus disorder prediction 264 283 - -
Prci3g3506 1012 MobiDBLite consensus disorder prediction 825 849 - -
Prci3g3506 1012 ProSiteProfiles Kinesin motor domain profile. 398 723 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci3g3506 1012 Gene3D - 27 184 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3506 Prci-Chr3 44953440 44959621 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3506 386 762 Calmodulin-binding Proteins AT5G65930 41.775 4.03e-79 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3506 K10406 - gmx:100801279 1554.27