Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3491 ATGTCCACCATGCACCCCCTCAACCTCAAGAGAGGAACACTCTCCCTGGCCCTTGTTTCCCTTGCTTCTCTGCTCTTACTCCTCGTCAAAGCAACAAAACCACAAGATATAATGCACCTACATTTCCAGAAACACCTTCAAGTAGCTCACTCCACCTGCCAAGGAACTCTCTACCCTCACCTCTGTGCCTCCACACTTGCTTCCTTCCCGGATCTTCCCTCTAAATCTGTTCCCCAGCTCATCTGCTCCCTCGTCAACCACACCATGTACGAGGTCAGATCCTCATCCTCCAACTGCACCGGTCTCAGAAGAAAGCTCAGAAATCTAAGCCCACTTCAGCAGAGAGCTCTCGATGACTGCCTCCAACTGTTTGATCACACCGAGGACGAGTTCAAAACCAGCATTGCCGATCTCTCCCAGACACAGATCGATTCCAAGCGCTACCACGACTTGCAGACTCTGCTCAGCGGCGCAATGACCAACGTTTACACGTGCCTCGACGGCTTCGCCGACGGTGACCCCAATGGGAAAGTGAGACGCACCATCCAGGACGGCTTGTACCGGATTTGCCACCACGTTAGTAACTCCCTGGCCATGCTCAAGAAAGTGAAGGGGGTGAAGAAACCGTCACCGTCTGAGGCATTCCCGGAGTCGTACGGCAAAATGAAGCATGGCTTCCCATCCTGGCTCACCTCCAAAGACAGAAGGCTTCTTCAAGGTACTGTCAATGAAACCAAGTTCGATCTAGTGGTGGCTAAAGACGGCTCCGGCAATTTCACCACTATTGGGGAAGCAGTGGCTGCGGCCCCCAACTCCACAAAAACCAGGTTTGTGATACACATAAAAGCTGGGGCATACTTCGAGAACGTGGAGGTGATCAGGAAGAAGACTAATCTGATGTTCGTTGGAGATGGCATTGGGAAGACGATAGTGAAAGCCGGTAGAAACGTCGTGGACGGGTGGACCACCTTTCAATCCGCTACTGTAGCGGTGGTAGGAGACGGGTTCATTGCGAAAGGGATAACCATAGAGAACTCGGCGGGGCCCAGCAAGCACCAAGCGGTGGCCCTCAGGAACGGCGCCGACCTATCCGCCTTCTATCAGTGCAGCTTTGTCGGCTACCAAGACACCCTCTACGCCCATTCCCTCCGTCAGTTCTACCGCGAATGCGACATCTACGGCACCGTCGACTTCATCTTCGGCAACGCCGCTGCCGTGCTCCAAAATTGTGGCCTGTACGCGCGCAAGCCAAACGACAAGCAGAAGAACCTGTTCACGGCTCAAGGCAGAGAGGACCCGAACCAGAACACAGGCATTTCCATAATCAGCTCCAAGGTGGCCGCCGCGTCGGACTTAATTCCGGTGAAGTCATCGTTCCAGTCGTATCTGGGGAGGCCGTGGAAGTTGTACTCGAGGACGGTGTACGTGGAATGCTTCATGGAGGATTTGATTGACCCTGCTGGATGGTTGGAATGGAACGGATCGTTCGCATTGGATACGCTGTATTACGGGGAGTACAAGAACAGGGGTCCAGGCTCCGATACGAGCAGGAGGGTGAAATGGAAAGGTTATAGAGTGATCAATTCCTCCGCAGAGGCTTCCCAGTTCACAGTTGCCCAGTTCATTCAGGGCCCTGACTGGTTGAACTCCACCGGCATTCCTTTCTTCCCTGATCTCAATTCCTGA 1686 0.5362 MSTMHPLNLKRGTLSLALVSLASLLLLLVKATKPQDIMHLHFQKHLQVAHSTCQGTLYPHLCASTLASFPDLPSKSVPQLICSLVNHTMYEVRSSSSNCTGLRRKLRNLSPLQQRALDDCLQLFDHTEDEFKTSIADLSQTQIDSKRYHDLQTLLSGAMTNVYTCLDGFADGDPNGKVRRTIQDGLYRICHHVSNSLAMLKKVKGVKKPSPSEAFPESYGKMKHGFPSWLTSKDRRLLQGTVNETKFDLVVAKDGSGNFTTIGEAVAAAPNSTKTRFVIHIKAGAYFENVEVIRKKTNLMFVGDGIGKTIVKAGRNVVDGWTTFQSATVAVVGDGFIAKGITIENSAGPSKHQAVALRNGADLSAFYQCSFVGYQDTLYAHSLRQFYRECDIYGTVDFIFGNAAAVLQNCGLYARKPNDKQKNLFTAQGREDPNQNTGISIISSKVAAASDLIPVKSSFQSYLGRPWKLYSRTVYVECFMEDLIDPAGWLEWNGSFALDTLYYGEYKNRGPGSDTSRRVKWKGYRVINSSAEASQFTVAQFIQGPDWLNSTGIPFFPDLNS 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3491 561 CDD PMEI-like_3 51 202 - -
Prci3g3491 561 SMART PMEI_2 44 199 IPR006501 GO:0004857
Prci3g3491 561 Pfam Plant invertase/pectin methylesterase inhibitor 50 199 IPR006501 GO:0004857
Prci3g3491 561 SUPERFAMILY Pectin lyase-like 246 557 IPR011050 -
Prci3g3491 561 PANTHER PECTINESTERASE 24 549 - -
Prci3g3491 561 Pfam Pectinesterase 248 544 IPR000070 GO:0030599|GO:0042545
Prci3g3491 561 NCBIfam pectinesterase inhibitor domain 18 184 IPR006501 GO:0004857
Prci3g3491 561 FunFam Pectinesterase 242 559 - -
Prci3g3491 561 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 50 202 IPR035513 -
Prci3g3491 561 ProSitePatterns Pectinesterase signature 2. 392 401 IPR033131 -
Prci3g3491 561 Gene3D - 242 559 IPR012334 -
Prci3g3491 561 Gene3D Invertase/pectin methylesterase inhibitor family protein 48 205 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3491 Prci-Chr3 44877315 44880887 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3491 74 559 Carbohydrate Esterase AT4G02320 54.509 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3491 K01051 - gmx:100802881 817.764