Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3490 ATGGCTTCCATGCTCTTGTCTCTTACTTTTACATGCCCCGTTTTCCTTCTGCTTTCCTTCTTTGCATGGTTATCTCTAGCAGATAACCCGGTGGCCTCCCTCATAATCCCACCAGACACAGCTTGTGACTCCACCATGCACCCTTCCCTCTGCAAAACCGTGCTCGGTAATCAAAAGGGCAACGTCTTTGACTTTGGCCGCATACTTCTTCGGAAGTCCTTATCCCAGTCTCGTAGATTCTTGAACCTGGTGGATTCCCATCTGAAATCTCCATCCTCTCTGTCTCAGTCCACCATTCGGGCTCTCGAGGATTGTCGCTTCCTCGCTGAGCTAAACTTCGAGTACTTATCCAACACCCTGGACGCTGTGAAAAATCTTAATGATTTTCTTTCTTCCTCTAGAGCCGAAGACCTCGAAACCCTCTTTAGTGCCGTTCTGACCAACCAGCAAACTTGTCAGGATGGCCTAGACACCACAGCTTCGGATCGAAGAGTAAAGGACGATCTTTCTTCCTCGCTCGCTGACGACACCGAGATTTACAGCGTGTCTCTTTCTCTGTTCACCAAAGGTTGGGCACCCGAGAAGAAAATCATAACATCATGGCCACGCAATGGGAGACACTTGGAGTTTCGAAATGGTCATTTGCCGTTGAAAATGTCACCCCGAGTAAAGGCCATTTTCGACTCCGCAAGACGCCACGGCAGAAAACTGCTCCAGTCCGATGACGACAGCGTGCTGGTTACCGACATCGTGGTTGTCAGTCAGGATGGAAGCGGAAACTTCACCACCATAACCGACGCCATAAATTCTGCCCCAAACAACACAGCTTCAGGCAATGGTTACTTCTTGATATTCATCACCGAGGGTGTGTACCAAGAATACGTATCCATACCCAAAAACAAAAAGTACTTGATGTTAGTGGGAGAAGGCATCAACCGCACAATCATCACTGGCGACCGCAATGTCGTCGACGGTTTCACAACATTCAACTCAGCGACGTTTGCCGTAGTAGCAGAAGGATTCGTGGCGGTGAACATTACATTCCGAAACACGGCGGGGCCGAGCAAGCATCAAGCCGTTGCGATGAGAAGCGGGGCGGACATGTCCACGTTCTACAGCTGCAGCTTTGAAGGGTACCAAGACACTCTGTACACACATTCTCTAAGGCAATTCTACAGAGAATGTGACATATACGGCACCGTGGACTTCATATTCGGGAACGCAGCCGTGATTCTTCAAAATTGCAACTTGTATCCTCGGCTTCCGATGAGCGGTCAGTTTAATGCGATCACGGCTCAGGGTCGAACGGACCCCAATCAGAACACGGGCACGTCCGTACAGAACGCAACCATAAAAGCAGCCGACGATTTGGCTCCGTCGGTAGGGTCGGTGAAGACGTACCTGGGAAGGCCGTGGAAGGAGTACTCGAGAACCGTGTTTATGGAGTCACGGATGGACAGCTTGATCGATCCTGCTGGTTGGCGGGCGTGGAGCGGGGACTTTGCCTTGAGCACGTTGTACTACGCAGAGTACAACAACAGTGGGCCGGGTGCTGACACGAGCAACAGGGTGACGTGGCCAGGTTACCACGTCATCAATGCCACGGATGCAGCTAATTTCACGGTGTCCAACTTCTTGACGGGGGATGCTTGGCTGCCTCAAACCGGGGTTCCATACTCTGGCGGCTTTACGTCCTAG 1698 0.513 MASMLLSLTFTCPVFLLLSFFAWLSLADNPVASLIIPPDTACDSTMHPSLCKTVLGNQKGNVFDFGRILLRKSLSQSRRFLNLVDSHLKSPSSLSQSTIRALEDCRFLAELNFEYLSNTLDAVKNLNDFLSSSRAEDLETLFSAVLTNQQTCQDGLDTTASDRRVKDDLSSSLADDTEIYSVSLSLFTKGWAPEKKIITSWPRNGRHLEFRNGHLPLKMSPRVKAIFDSARRHGRKLLQSDDDSVLVTDIVVVSQDGSGNFTTITDAINSAPNNTASGNGYFLIFITEGVYQEYVSIPKNKKYLMLVGEGINRTIITGDRNVVDGFTTFNSATFAVVAEGFVAVNITFRNTAGPSKHQAVAMRSGADMSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVILQNCNLYPRLPMSGQFNAITAQGRTDPNQNTGTSVQNATIKAADDLAPSVGSVKTYLGRPWKEYSRTVFMESRMDSLIDPAGWRAWSGDFALSTLYYAEYNNSGPGADTSNRVTWPGYHVINATDAANFTVSNFLTGDAWLPQTGVPYSGGFTS 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3490 565 FunFam Pectinesterase 245 563 - -
Prci3g3490 565 PANTHER PECTINESTERASE 29 553 - -
Prci3g3490 565 FunFam Pectinesterase 39 189 - -
Prci3g3490 565 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 189 IPR035513 -
Prci3g3490 565 SMART PMEI_2 33 186 IPR006501 GO:0004857
Prci3g3490 565 SUPERFAMILY Pectin lyase-like 248 562 IPR011050 -
Prci3g3490 565 Pfam Plant invertase/pectin methylesterase inhibitor 40 185 IPR006501 GO:0004857
Prci3g3490 565 CDD PMEI-like_3 40 192 - -
Prci3g3490 565 NCBIfam pectinesterase inhibitor domain 4 187 IPR006501 GO:0004857
Prci3g3490 565 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 189 IPR035513 -
Prci3g3490 565 ProSitePatterns Pectinesterase signature 2. 397 406 IPR033131 -
Prci3g3490 565 Gene3D - 245 563 IPR012334 -
Prci3g3490 565 Pfam Pectinesterase 251 549 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3490 Prci-Chr3 44868758 44870775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3490 15 565 Carbohydrate Esterase AT4G02330 59.582 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3490 K01051 - gmx:100813051 850.121