Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3473 ATGAGTCGAGCGGCAGCAACTGGAGCCAAGGGCAAGAAGAAGTCGATCAGCTTCGTGATCGACTGCTCGAAGCCTGTCGAAGATAAGATTATGGACGTCGCCTCGCTCGAGAAGTTTCTTCAGGAGAGGATAAAAGTAGGTGGCAAGGCTGGTGCCCTCGGCGATTCTGTCACCGTCACTCGTGACAAGAGCAAGATCACCGTTACTTCCGACAGCAGTTTCTCTAAACGGTATTTGAAATATTTGACAAAGAAGTACCTGAAGAAGAATAATGTGAGGGATTGGCTTCGCGTGATTGCCTCCAACAAGGACCGGAATGTCTATGAGTTAAGATACTTCAACATCGCCGAGAACGAGGGAGAGGAGGAAGACTAG 375 0.4907 MSRAAATGAKGKKKSISFVIDCSKPVEDKIMDVASLEKFLQERIKVGGKAGALGDSVTVTRDKSKITVTSDSSFSKRYLKYLTKKYLKKNNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3473 124 FunFam 60S ribosomal protein L22-2 5 124 - -
Prci3g3473 124 Gene3D - 4 124 IPR038526 -
Prci3g3473 124 PANTHER 60S RIBOSOMAL PROTEIN L22 1 124 IPR002671 GO:0003735|GO:0005840|GO:0006412
Prci3g3473 124 Pfam Ribosomal L22e protein family 14 122 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3473 Prci-Chr3 44803625 44805478 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3473 1 124 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 85.484 2.11e-66 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3473 K02891 - pop:7455994 210.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g3473 3 44803625 44805478 Prci3g3473 3 44803625 44805478 ECH