Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3471 ATGTTTCATGTTTCATCATCCTTCAACTTCTCTCGTTATAAAATGATCAGAATATCGTGTCTCGTGTTTCTTCTGCTCGTGTTCTTGTGTCCTTCGTTCCTGACAAATACAGGCCATCTGGTGGCTGCAAAAGGGAACGACTATGTCAGAGACGCGTGCTCGGTGACTAGGTACCCAGACTTGTGTATCCACTCGCTCGCATCATTTTCCAGCACGGCCAGAAGGAGCCCGAGCAGGTGGGCCCGAGCAGGAGTGTCGGTGACCATAAGTGAGGTTAAGAATGTTCAGTCTCGTCTCGCCAAGTTGAAGAGATACCGTCGTCTGAGAGGAAGAAACAGAGATGCTCTTTTAGATTGCATCGAGTCTTTCGCAGATGCGCTTGATGAGCTTCACAGATCCCTTGGCGTGCTCAGGAGGCTGAGCAGGAGCACCTTTGGTAACCAGATGGATGATCTCAATACATGGATAAGTGCAGCTCTCACTGATGAAGATACTTGTCTTGATGGGTTTGAAGGCCAAAAGGAGAGGCAAATTAAATTGCTGCAGGATCAGGTTCTGAACGTCTCTTACATAACCAGTAACGCTCTTGCTCTTGTCAACAAGCTCGCCACTACAGGTCTGGACAGCATCAATGATCCATACAAGTTCTGA 651 0.4793 MFHVSSSFNFSRYKMIRISCLVFLLLVFLCPSFLTNTGHLVAAKGNDYVRDACSVTRYPDLCIHSLASFSSTARRSPSRWARAGVSVTISEVKNVQSRLAKLKRYRRLRGRNRDALLDCIESFADALDELHRSLGVLRRLSRSTFGNQMDDLNTWISAALTDEDTCLDGFEGQKERQIKLLQDQVLNVSYITSNALALVNKLATTGLDSINDPYKF 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3471 216 SMART PMEI_2 44 198 IPR006501 GO:0004857
Prci3g3471 216 Gene3D Invertase/pectin methylesterase inhibitor family protein 45 204 IPR035513 -
Prci3g3471 216 NCBIfam pectinesterase inhibitor domain 19 202 IPR006501 GO:0004857
Prci3g3471 216 Pfam Plant invertase/pectin methylesterase inhibitor 48 198 IPR006501 GO:0004857
Prci3g3471 216 CDD PMEI-like_3 52 204 - -
Prci3g3471 216 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 46 202 IPR035513 -
Prci3g3471 216 FunFam Pectinesterase inhibitor 3 44 203 - -
Prci3g3471 216 PANTHER PECTINESTERASE INHIBITOR-LIKE 22 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3471 Prci-Chr3 44794620 44795693 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3471 49 216 Carbohydrate Esterase AT3G14310 33.526 1.37e-22 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3471 - - qsu:112006490 244.202