Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3460 ATGAAGTTCTGCAAGAAATACGAAGAATACATGCAAGGCCAGCAGAAGAAACTTCCTGGAGTTGGTATCAAGAAGCTCAAGAAGATATTGAAAAAATGCAGCAGAGACTGCCGATCCCGCAAAGGCCTTAATGAAGCCATTGGCGTCAGAACCTGCAGCGACCAATGCCCAGTGTGTGATGGAAGCTTCTTCCCTTCCCTTCTCGACGGGATGACTGAAGTAGTAGGTTGTTTTAATGAGCGTGCCCAAAAGTTGTTGAAGCTGCATCTTGCTTCTGGCTTCAGAAAGTACCTTTTCTGGATCAAAGGCAACTTACCTGGAAAACAAACCGCCCTCGTTCAAGAAGGCAAAGACCTGGTTATTTATGCTCTAATTAATGCCATTGCAATTCGAAAGATACTCAAGAAATATGATAAGATTCATTATTCGAAACAAGGACAATTATTTAAGTCAGAAGCCCAGAGTAAGCACATGGAAATTCTTCAGAGTCCCTGGCTTTGTGAGCTCATGGCATTCCACATCAATTTAAGGGAAACCAAGAATAAATCAATGAAGAGGCCACCTGCTTTCTTTGATGGATGTTCCCTCATATATAAGGACGATAAACCATCACTTACTTGTGAGCGATTTGATTCCATCAAACTTGATATTGACTTGACTTGTTCTATATGCTTGGACACAGTATTTGATCCAGTTTGTCTTACTTGTGGCCACATATTCTGCTACATGTGTGCTTGCTCGTCTGCATCAGTAACTATTGTTGATGGACTTGAGGCAGCAAATTCTAATGCGAAATGTCCTCTCTGCCGAGTGAGTTCTATTCTTGTTGATTGTAGCGAGGAGTCTATCAAGGTGCCGTGCGTTTGGAAGAGTTAA 876 0.4212 MKFCKKYEEYMQGQQKKLPGVGIKKLKKILKKCSRDCRSRKGLNEAIGVRTCSDQCPVCDGSFFPSLLDGMTEVVGCFNERAQKLLKLHLASGFRKYLFWIKGNLPGKQTALVQEGKDLVIYALINAIAIRKILKKYDKIHYSKQGQLFKSEAQSKHMEILQSPWLCELMAFHINLRETKNKSMKRPPAFFDGCSLIYKDDKPSLTCERFDSIKLDIDLTCSICLDTVFDPVCLTCGHIFCYMCACSSASVTIVDGLEAANSNAKCPLCRVSSILVDCSEESIKVPCVWKS 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3460 291 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 274 IPR033326 -
Prci3g3460 291 ProSiteProfiles Zinc finger RING-type profile. 221 270 IPR001841 -
Prci3g3460 291 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 208 284 IPR013083 -
Prci3g3460 291 SUPERFAMILY RING/U-box 214 272 - -
Prci3g3460 291 Pfam Zinc finger, C3HC4 type (RING finger) 218 271 - -
Prci3g3460 291 ProSiteProfiles SPX domain profile. 1 151 IPR004331 -
Prci3g3460 291 SMART ring_2 221 269 IPR001841 -
Prci3g3460 291 ProSitePatterns Zinc finger RING-type signature. 236 245 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3460 Prci-Chr3 44727105 44730223 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3460 218 270 C3H Transcription Factor Family AT4G28270 41.379 1.29e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3460 K16275 - gmx:100797432 421.009