Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3447 ATGGTCGAAACTAGACGGGGCTCGTCCACTTCCAAGCGCTCTCACTCTTCATCCTCCTCTTCCAACGTCAAACGACCCAAGGTGCCCAACGATTCTTCGACAAGAAGTCTGCCGTCAGCGGAAATCCTTGGTCCGGTCAACGAACCTGGAAATGAATCCCGAGAGACGGAGCTAAATCGGTCTAACCTTCCAGATGCCGATTCGTTGAAAGCTATGGACGTTTGTGACGCGACGCTAGCTGAGAAATCTCCCGCCATGGCCGTCGTCAAAGGCGAGGTTTTGACATCGCCGCAGCCTCGAGGTGAAACTGTGGCGGATGGAGAGAAATCAAAGGTGGTTGGAGCGGCCGCCGTACGCCGGTCCAAGAAACGCTCAGCGAAATCAACTAAAACGAGGCCGAAGGCTGCATGGGGAAGGCTTCTTTCCCAGTGTTCCCAGAATCAACATCTGTCCTTGTGGAGTTCTCAATTCACTGTTGGTCATGGCCGTCAATGTAATTTATGGCTTAATGATCAAGCTGTTAGTGATGTTTTGTGCAAGTTGAAGCTCACCAAGCATGGAGGTTCATCTGTTGGATTACTGGAAATCATAGGGGATAAAGGTGCTGTCCAAGTTAATGGCAGGAATTACAAAAAAAATTCCAGCCTGATATTGAATGCAGGTGATGAGGTGGTTTTCAGTTCTGACAAGAATGCTTATATTTTTCAGCAGCTCACCAATAATGATGTCGCTGCTGCCAGGATACCTTGTTCTAATGCTGAGGCTTCATCAAAAACTTCTGGCCATGGGGATGATACTACCGACCCAAATTATACCACCAATAATGGCAGTCCAGCTGAAATTTCTGCTGAGAAAGCTACTCTTGCATCCTCTGCCACTGCCAATGAAAATTTTGACCTTTACAGTATGAAAGTGGATGTTGGGAGGTTGACAGGAGCCACACGTGAGTTAAGGCCTTTGTTGTGCAAGCTCGCTGGCCTGTGTGCTGAATTCAATATAAATGATAGGTTTTCCAAAATATTTGAACAAAGAGAATCAAGAGAACTCTCCAAGGATGTTGATCCTCTAACTAATTTAGTTTACATCAGGCAGCAAGCATTCAAAAACAGTTTACAACAAGGAATTCTCAATCCTGATGATATTGATGTGTCATTCAAAAATTTCCCGTATTATATAAGTGATCCTACAAAAAGTGCTCTGATTGCTTCTATGCACATTCATTTGAAGCAAAATGGTTTTGCAAAGTTTGCTTCAGGCCTACCTTCACTGTGCCCCCGAATATTGTTATCTGGTCCTCCAGGTTCTGAAATATATCAGGAATCCTTGTCCAAGGCACTTGCAAAGCATTTTGGTGCTAGGCTATTAGTTGTGGATTCTTTCACCCTGCCTGGTAGAACACCATCAAAGGATTCTGATTCTACCAAGCAAAGTTCAAAGCCTGAAAAAGTGTATGTTTCTGCAAAACAGAGTGCCCAGGTTGCCACATTGCAGCATAATAAACCAACTTCAAGTGTCGATGCTGATCTTATTGATGAATCCTCATTAAGTTCTCAGGTTATGCTGAAGCAGGAGGTATCTACTGCATCATCCAAAGGCCCTATGCTTAAAACAGGTGAGCGAGTAAAATTTGTTGGCAAGCTTCCCTCTGCAGTCTCATTGTTGCAAAATTATCCTTCAAGAGGACCGAGGTATGGCTCCCGTGGCAAAGTTCTTCTTGCTTTTCAAGAAAATGAGTCTTCAAAAATTGGGGTTAGATTCGACAAACCAATTCCAGATGGGAATGATCTTGGAGGGCTATGTGAAGCTGATCGTGGTTTTTTTTGTTCTGCTAATCATTTACTACGAGTAGATAACTTTGGAGGGGATGACGCCAACAAGCTTGCTATTAATGAAATCTTTGAGGTTGTCTTTGATCAGAGTAAAAGTGGTGGGTTGGTGTTGTTCTTGAAAGATATAGAGAAGGCTGTGATAGGGAACTCAGACGTCTTAAAAAGCAGGCTTGAAAGTTTGCCACAAAATGTTGTTGTAATTGGCTCACATGCCCAAGTGGACTACCGCAAGGACAAGACCCAGCCTAGTAGCCTTCTGTTCACAAAATTTGTGAGCGCCCGGGCAGCTTTATTTGATCTTGCTTTTCCGGATAGCTTTAGTAGATTGCATGATAGGAGCAAGGAAACCCCCAAAGTGATGAAGCAACTTAACCGTCTTTTTCCAAACAAAGTATCAATACAGCTGCCTCAGGATGAGGCTTTGCTCTCTTATTGGAAGCAGCAGCTAGAACATGACATTGAAACTATGAAAGCTCAGTCTAATATTGTCAGCATTCGCACAGTTCTTGACAAGTTTGGATTTATTTGCCCTGATCTTGAAAATCTTTGCATTAATGATCAAACCCTAAGAACTGAAAGTGTGGAGAAAATTGTTGGCTGGGCATTAAGTTACCACCTAATGCATCCATCTGAAGAATCAACCAAAGACTCTATGATCGTGTTGTCTACTGAAAGCATTAAGTATGGGCTGAGCATTCTACAGGGTATCCAAGGAGAAAGCAAGAACTTAAAGAAATCACTGAAGGATGTAATTACTGAGAATGAATTTGAGAAAAAATTGCTTGCTGATGTTATTCCTCCAAGTGATGTTGGGGTCAAATTTGATGATATTGGAGCTTTAGAAAATGTGAAGGACACCTTGAATGAATTGGTCATGCTTCCCCTTCAGAGGCCTGAATTGTTTTCCAAAGGACAGTTGACCAAGCCTTGCAAGGGGATATTGCTTTTTGGGCCACCTGGTGTTGGAAAAACAATGCTTGCAAAGGCTGTAGCTACTGAGGCTGGAGCAAATTTCATCAACATCTCAATGTCCAGTATTACCTCAAAGTGGTTTGGTGAAGGAGAGAAATATGTCAAAGCAGTATTTTCTCTGGCAAGTAAAATTGCTCCAAGTGTTATTTTTGTTGATGAGGTTGATAGTATGTTAGGAAGACGTGAAAATCCTGGTGAGCATGAGGCTATGCGTAAAATGAAGAATGAATTTATGGTGAATTGGGATGGTCTGTGTACAAAAGACAATGAGCGCATACTCGTACTTGCTGCTACAAATCGACCCTTTGACCTTGATGAGGCTGTTATTAGGAGGCTTCCACGAAGATTAATGGTCAATTTGCCAGATGCTCTTAACAGAGAAAAAATTCTTAAAGTAATTTTAGCAAAAGAAGATCTGGCACCTGATGTCGATTTGGAAGCAATATCAAACATGACTGATGGATATTCTGGGAGTGACCTAAAGAATCTGTGCGTCTTAGCAGCTCACTGTCCAATAAGAGAGATATTGGAGAAGGAAAAGAAGGAGAGAAGTTTGGCACTGGCTGCGAATAGACCTTCACCTCCATTGTCTAGCAGTACTGACATTCGGCCCTTAAAGATGGAGGATTTTAGATATGCACTTGAGCAGGTGTGTGCAAGCGTGTCGTCAGAGTCAACAAATATGAACGAGCTGCTCCAATGGAATGACCTTTACGGGGAAGGTGGATCCAGAAAAATGAGATCTTTGAGCTATTTTCTGTGA 3564 0.4276 MVETRRGSSTSKRSHSSSSSSNVKRPKVPNDSSTRSLPSAEILGPVNEPGNESRETELNRSNLPDADSLKAMDVCDATLAEKSPAMAVVKGEVLTSPQPRGETVADGEKSKVVGAAAVRRSKKRSAKSTKTRPKAAWGRLLSQCSQNQHLSLWSSQFTVGHGRQCNLWLNDQAVSDVLCKLKLTKHGGSSVGLLEIIGDKGAVQVNGRNYKKNSSLILNAGDEVVFSSDKNAYIFQQLTNNDVAAARIPCSNAEASSKTSGHGDDTTDPNYTTNNGSPAEISAEKATLASSATANENFDLYSMKVDVGRLTGATRELRPLLCKLAGLCAEFNINDRFSKIFEQRESRELSKDVDPLTNLVYIRQQAFKNSLQQGILNPDDIDVSFKNFPYYISDPTKSALIASMHIHLKQNGFAKFASGLPSLCPRILLSGPPGSEIYQESLSKALAKHFGARLLVVDSFTLPGRTPSKDSDSTKQSSKPEKVYVSAKQSAQVATLQHNKPTSSVDADLIDESSLSSQVMLKQEVSTASSKGPMLKTGERVKFVGKLPSAVSLLQNYPSRGPRYGSRGKVLLAFQENESSKIGVRFDKPIPDGNDLGGLCEADRGFFCSANHLLRVDNFGGDDANKLAINEIFEVVFDQSKSGGLVLFLKDIEKAVIGNSDVLKSRLESLPQNVVVIGSHAQVDYRKDKTQPSSLLFTKFVSARAALFDLAFPDSFSRLHDRSKETPKVMKQLNRLFPNKVSIQLPQDEALLSYWKQQLEHDIETMKAQSNIVSIRTVLDKFGFICPDLENLCINDQTLRTESVEKIVGWALSYHLMHPSEESTKDSMIVLSTESIKYGLSILQGIQGESKNLKKSLKDVITENEFEKKLLADVIPPSDVGVKFDDIGALENVKDTLNELVMLPLQRPELFSKGQLTKPCKGILLFGPPGVGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLCTKDNERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDALNREKILKVILAKEDLAPDVDLEAISNMTDGYSGSDLKNLCVLAAHCPIREILEKEKKERSLALAANRPSPPLSSSTDIRPLKMEDFRYALEQVCASVSSESTNMNELLQWNDLYGEGGSRKMRSLSYFL 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3447 1187 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 881 1057 - -
Prci3g3447 1187 Pfam ATPase family associated with various cellular activities (AAA) 923 1052 IPR003959 GO:0005524|GO:0016887
Prci3g3447 1187 MobiDBLite consensus disorder prediction 254 278 - -
Prci3g3447 1187 MobiDBLite consensus disorder prediction 1 66 - -
Prci3g3447 1187 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 365 1186 - -
Prci3g3447 1187 MobiDBLite consensus disorder prediction 11 40 - -
Prci3g3447 1187 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 882 1161 IPR027417 -
Prci3g3447 1187 Pfam AAA+ lid domain 1076 1112 IPR041569 -
Prci3g3447 1187 Gene3D - 136 245 - -
Prci3g3447 1187 SUPERFAMILY SMAD/FHA domain 137 235 IPR008984 GO:0005515
Prci3g3447 1187 ProSitePatterns AAA-protein family signature. 1026 1045 IPR003960 GO:0005524|GO:0016887
Prci3g3447 1187 SMART AAA_5 919 1056 IPR003593 GO:0016887
Prci3g3447 1187 Gene3D - 881 1161 IPR027417 -
Prci3g3447 1187 Gene3D - 1055 1149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3447 Prci-Chr3 44654764 44668133 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3447 879 1121 Calmodulin-binding Proteins AT3G56690 32.794 1.80e-30 128