Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3446 ATGGTCGAAACTAGACGGGGCTCGTCCACTTCCAAGCGCTCTCACTCTTCATCCTCCTCTTCCAACGTCAAACGACCCAAGGTGCCCAACGATTCTTCGACAAGAAGTCTGCCGTCAGCGGAAATCCTTGGTCCGGTCAACGAACCTGGAAATGAATCCCGAGAGACGGAGCTAAATCGGTCTAACCTTCCAGATGCCGATTCGTTGAAAGCTATGGACGTTTGTGACGCGACGCTAGCTGAGAAATCTCCCGCCATGGCCGTCGTCAAAGGCGAGGTTTTGACATCGCCGCAGCCTCGAGGTGAAACTGTGGCGGATGGAGAGAAATCAAAGGTGGTTGGAGCGGCCGCCGTACGCCGGTCCAAGAAACGCTCAGCGAAATCAACTAAAACGAGGCCGAAGGCTGCATGGGGAAGGCTTCTTTCCCAGTGTTCCCAGAATCAACATCTGTCCTTGTGGAGTTCTCAATTCACTGTTGGTCATGGCCGTCAATGTAATTTATGGCTTAATGATCAAGCTGTTAGTGATGTTTTGTGCAAGTTGAAGCTCACCAAGCATGGAGGTTCATCTGTTGGATTACTGGAAATCATAGGGGATAAAGGTGCTGTCCAAGTTAATGGCAGGAATTACAAAAAAAATTCCAGCCTGATATTGAATGCAGGTGATGAGGTGGTTTTCAGTTCTGACAAGAATGCTTATATTTTTCAGCAGCTCACCAATAATGATGTCGCTGCTGCCAGGATACCTTGTTCTAATGCTGAGGCTTCATCAAAAACTTCTGGCCATGGGGATGATACTACCGACCCAAATTATACCACCAATAATGGCAGTCCAGCTGAAATTTCTGCTGAGAAAGCTACTCTTGCATCCTCTGCCACTGCCAATGAAAATTTTGACCTTTACAGTATGAAAGTGGATGTTGGGAGGTTGACAGGAGCCACACGTGAGTTAAGGCCTTTGTTGTGCAAGCTCGCTGGCCTGTGTGCTGAATTCAATATAAATGATAGGTTTTCCAAAATATTTGAACAAAGAGAATCAAGAGAACTCTCCAAGGATGTTGATCCTCTAACTAATTTAGTTTACATCAGGCAGCAAGCATTCAAAAACAGTTTACAACAAGGAATTCTCAATCCTGATGATATTGATGTGTCATTCAAAAATTTCCCGTATTATATAAGTGATCCTACAAAAAGTGCTCTGATTGCTTCTATGCACATTCATTTGAAGCAAAATGGTTTTGCAAAGTTTGCTTCAGGCCTACCTTCACTGTGCCCCCGAATATTGTTATCTGGTCCTCCAGGTTCTGAAATATATCAGGAATCCTTGTCCAAGGCACTTGCAAAGCATTTTGGTGCTAGGCTATTAGTTGTGGATTCTTTCACCCTGCCTGGTAGTGCCCAGGTTGCCACATTGCAGCATAATAAACCAACTTCAAGTGTCGATGCTGATCTTATTGATGAATCCTCATTAAGTTCTCAGGTTATGCTGAAGCAGGAGGTATCTACTGCATCATCCAAAGGCCCTATGCTTAAAACAGGTGAGCGAGTAAAATTTGTTGGCAAGCTTCCCTCTGCAGTCTCATTGTTGCAAAATTATCCTTCAAGAGGACCGAGGTATGGCTCCCGTGGCAAAGTTCTTCTTGCTTTTCAAGAAAATGAGTCTTCAAAAATTGGGGTTAGATTCGACAAACCAATTCCAGATGGGAATGATCTTGGAGGGCTATGTGAAGCTGATCGTGGTTTTTTTTGTTCTGCTAATCATTTACTACGAGTAGATAACTTTGGAGGGGATGACGCCAACAAGCTTGCTATTAATGAAATCTTTGAGGTTGTCTTTGATCAGAGTAAAAGTGGTGGGTTGGTGTTGTTCTTGAAAGATATAGAGAAGGCTGTGATAGGGAACTCAGACGTCTTAAAAAGCAGGCTTGAAAGTTTGCCACAAAATGTTGTTGTAATTGGCTCACATGCCCAAGTGGACTACCGCAAGGACAAGACCCAGCCTAGTAGCCTTCTGTTCACAAAATTTGTGAGCGCCCGGGCAGCTTTATTTGATCTTGCTTTTCCGGATAGCTTTAGTAGATTGCATGATAGGAGCAAGGAAACCCCCAAAGTGATGAAGCAACTTAACCGTCTTTTTCCAAACAAAGTATCAATACAGCTGCCTCAGGATGAGGCTTTGCTCTCTTATTGGAAGCAGCAGCTAGAACATGACATTGAAACTATGAAAGCTCAGTCTAATATTGTCAGCATTCGCACAGTTCTTGACAAGTTTGGATTTATTTGCCCTGATCTTGAAAATCTTTGCATTAATGATCAAACCCTAAGAACTGAAAGTGTGGAGAAAATTGTTGGCTGGGCATTAAGTTACCACCTAATGCATCCATCTGAAGAATCAACCAAAGACTCTATGATCGTGTTGTCTACTGAAAGCATTAAGTATGGGCTGAGCATTCTACAGGGTATCCAAGGAGAAAGCAAGAACTTAAAGAAATCACTGAAGGATGTAATTACTGAGAATGAATTTGAGAAAAAATTGCTTGCTGATGTTATTCCTCCAAGTGATGTTGGGGTCAAATTTGATGATATTGGAGCTTTAGAAAATGTGAAGGACACCTTGAATGAATTGGTCATGCTTCCCCTTCAGAGGCCTGAATTGTTTTCCAAAGGACAGTTGACCAAGCCTTGCAAGGGGATATTGCTTTTTGGGCCACCTGGTGTTGGAAAAACAATGCTTGCAAAGGCTGTAGCTACTGAGGCTGGAGCAAATTTCATCAACATCTCAATGTCCAGTATTACCTCAAAGTGGTTTGGTGAAGGAGAGAAATATGTCAAAGCAGTATTTTCTCTGGCAAGTAAAATTGCTCCAAGTGTTATTTTTGTTGATGAGGTTGATAGTATGTTAGGAAGACGTGAAAATCCTGGTGAGCATGAGGCTATGCGTAAAATGAAGAATGAATTTATGGTGAATTGGGATGGTCTGTGTACAAAAGACAATGAGCGCATACTCGTACTTGCTGCTACAAATCGACCCTTTGACCTTGATGAGGCTGTTATTAGGAGGCTTCCACGAAGATTAATGGTCAATTTGCCAGATGCTCTTAACAGAGAAAAAATTCTTAAAGTAATTTTAGCAAAAGAAGATCTGGCACCTGATGTCGATTTGGAAGCAATATCAAACATGACTGATGGATATTCTGGGAGTGACCTAAAGAATCTGTGCGTCTTAGCAGCTCACTGTCCAATAAGAGAGATATTGGAGAAGGAAAAGAAGGAGAGAAGTTTGGCACTGGCTGCGAATAGACCTTCACCTCCATTGTCTAGCAGTACTGACATTCGGCCCTTAAAGATGGAGGATTTTAGATATGCACTTGAGCAGGTGTGTGCAAGCGTGTCGTCAGAGTCAACAAATATGAACGAGCTGCTCCAATGGAATGACCTTTACGGGGAAGGTGGATCCAGAAAAATGAGATCTTTGAGCTATTTTCTGTGA 3489 0.4288 MVETRRGSSTSKRSHSSSSSSNVKRPKVPNDSSTRSLPSAEILGPVNEPGNESRETELNRSNLPDADSLKAMDVCDATLAEKSPAMAVVKGEVLTSPQPRGETVADGEKSKVVGAAAVRRSKKRSAKSTKTRPKAAWGRLLSQCSQNQHLSLWSSQFTVGHGRQCNLWLNDQAVSDVLCKLKLTKHGGSSVGLLEIIGDKGAVQVNGRNYKKNSSLILNAGDEVVFSSDKNAYIFQQLTNNDVAAARIPCSNAEASSKTSGHGDDTTDPNYTTNNGSPAEISAEKATLASSATANENFDLYSMKVDVGRLTGATRELRPLLCKLAGLCAEFNINDRFSKIFEQRESRELSKDVDPLTNLVYIRQQAFKNSLQQGILNPDDIDVSFKNFPYYISDPTKSALIASMHIHLKQNGFAKFASGLPSLCPRILLSGPPGSEIYQESLSKALAKHFGARLLVVDSFTLPGSAQVATLQHNKPTSSVDADLIDESSLSSQVMLKQEVSTASSKGPMLKTGERVKFVGKLPSAVSLLQNYPSRGPRYGSRGKVLLAFQENESSKIGVRFDKPIPDGNDLGGLCEADRGFFCSANHLLRVDNFGGDDANKLAINEIFEVVFDQSKSGGLVLFLKDIEKAVIGNSDVLKSRLESLPQNVVVIGSHAQVDYRKDKTQPSSLLFTKFVSARAALFDLAFPDSFSRLHDRSKETPKVMKQLNRLFPNKVSIQLPQDEALLSYWKQQLEHDIETMKAQSNIVSIRTVLDKFGFICPDLENLCINDQTLRTESVEKIVGWALSYHLMHPSEESTKDSMIVLSTESIKYGLSILQGIQGESKNLKKSLKDVITENEFEKKLLADVIPPSDVGVKFDDIGALENVKDTLNELVMLPLQRPELFSKGQLTKPCKGILLFGPPGVGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLCTKDNERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDALNREKILKVILAKEDLAPDVDLEAISNMTDGYSGSDLKNLCVLAAHCPIREILEKEKKERSLALAANRPSPPLSSSTDIRPLKMEDFRYALEQVCASVSSESTNMNELLQWNDLYGEGGSRKMRSLSYFL 1162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3446 1162 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 856 1032 - -
Prci3g3446 1162 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 857 1136 IPR027417 -
Prci3g3446 1162 MobiDBLite consensus disorder prediction 254 278 - -
Prci3g3446 1162 MobiDBLite consensus disorder prediction 1 66 - -
Prci3g3446 1162 SMART AAA_5 894 1031 IPR003593 GO:0016887
Prci3g3446 1162 MobiDBLite consensus disorder prediction 11 40 - -
Prci3g3446 1162 Gene3D - 1030 1124 - -
Prci3g3446 1162 ProSitePatterns AAA-protein family signature. 1001 1020 IPR003960 GO:0005524|GO:0016887
Prci3g3446 1162 Pfam ATPase family associated with various cellular activities (AAA) 898 1027 IPR003959 GO:0005524|GO:0016887
Prci3g3446 1162 Gene3D - 856 1136 IPR027417 -
Prci3g3446 1162 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 365 1161 - -
Prci3g3446 1162 SUPERFAMILY SMAD/FHA domain 137 235 IPR008984 GO:0005515
Prci3g3446 1162 Pfam AAA+ lid domain 1051 1087 IPR041569 -
Prci3g3446 1162 Gene3D - 136 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3446 Prci-Chr3 44654763 44668133 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3446 893 1096 Calmodulin-binding Proteins AT3G56690 35.096 2.10e-30 128