Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci3g3445 | ATGGTCGAAACTAGACGGGGCTCGTCCACTTCCAAGCGCTCTCACTCTTCATCCTCCTCTTCCAACGTCAAACGACCCAAGGTGCCCAACGATTCTTCGACAAGAAGTCTGCCGTCAGCGGAAATCCTTGGTCCGGTCAACGAACCTGGAAATGAATCCCGAGAGACGGAGCTAAATCGGTCTAACCTTCCAGATGCCGATTCGTTGAAAGCTATGGACGTTTGTGACGCGACGCTAGCTGAGAAATCTCCCGCCATGGCCGTCGTCAAAGGCGAGGTTTTGACATCGCCGCAGCCTCGAGGTGAAACTGTGGCGGATGGAGAGAAATCAAAGGTGGTTGGAGCGGCCGCCGTACGCCGGTCCAAGAAACGCTCAGCGAAATCAACTAAAACGAGGCCGAAGGCTGCATGGGGAAGGCTTCTTTCCCAGTGTTCCCAGAATCAACATCTGTCCTTGTGGAGTTCTCAATTCACTGTTGGTCATGGCCGTCAATGTAATTTATGGCTTAATGATCAAGCTGTTAGTGATGTTTTGTGCAAGTTGAAGCTCACCAAGCATGGAGGTTCATCTGTTGGATTACTGGAAATCATAGGGGATAAAGGTGCTGTCCAAGTTAATGGCAGGAATTACAAAAAAAATTCCAGCCTGATATTGAATGCAGGTGATGAGGTGGTTTTCAGTTCTGACAAGAATGCTTATATTTTTCAGCAGCTCACCAATAATGATGTCGCTGCTGCCAGGATACCTTGTTCTAATGCTGAGGCTTCATCAAAAACTTCTGGCCATGGGGATGATACTACCGACCCAAATTATACCACCAATAATGGCAGTCCAGCTGAAATTTCTGCTGAGAAAGCTACTCTTGCATCCTCTGCCACTGCCAATGAAAATTTTGACCTTTACAGTATGAAAGTGGATGTTGGGAGGTTGACAGGAGCCACACGTGAGTTAAGGCCTTTGTTGTGCAAGCTCGCTGGCCTGTGTGCTGAATTCAATATAAATGATAGGTTTTCCAAAATATTTGAACAAAGAGAATCAAGAGAACTCTCCAAGGATGTTGATCCTCTAACTAATTTAGTTTACATCAGGCAGCAAGCATTCAAAAACAGTTTACAACAAGGAATTCTCAATCCTGATGATATTGATGTGTCATTCAAAAATTTCCCGTATTATATAAGTGATCCTACAAAAAGTGCTCTGATTGCTTCTATGCACATTCATTTGAAGCAAAATGGTTTTGCAAAGTTTGCTTCAGGCCTACCTTCACTGTGCCCCCGAATATTGTTATCTGGTCCTCCAGGTTCTGAAATATATCAGGAATCCTTGTCCAAGGCACTTGCAAAGCATTTTGGTGCTAGGCTATTAGTTGTGGATTCTTTCACCCTGCCTGGTAGAACACCATCAAAGGATTCTGATTCTACCAAGCAAAGTTCAAAGCCTGAAAAAGTGTATGTTTCTGCAAAACAGAGTGCCCAGGTTGCCACATTGCAGCATAATAAACCAACTTCAAGTGTCGATGCTGATCTTATTGATGAATCCTCATTAAGTTCTCAGGTTATGCTGAAGCAGGAGGTATCTACTGCATCATCCAAAGGCCCTATGCTTAAAACAGCCTTCAGGTCTCATCTTGATTCTTCTATTGTGCTCATTAGAGGACCGAGGTATGGCTCCCGTGGCAAAGTTCTTCTTGCTTTTCAAGAAAATGAGTCTTCAAAAATTGGGGTTAGATTCGACAAACCAATTCCAGATGGGAATGATCTTGGAGGGCTATGTGAAGCTGATCGTGGTTTTTTTTGTTCTGCTAATCATTTACTACGAGTAGATAACTTTGGAGGGGATGACGCCAACAAGCTTGCTATTAATGAAATCTTTGAGGTTGTCTTTGATCAGAGTAAAAGTGGTGGGTTGGTGTTGTTCTTGAAAGATATAGAGAAGGCTGTGATAGGGAACTCAGACGTCTTAAAAAGCAGGCTTGAAAGTTTGCCACAAAATGTTGTTGTAATTGGCTCACATGCCCAAGTGGACTACCGCAAGGACAAGACCCAGCCTAGTAGCCTTCTGTTCACAAAATTTGTGAGCGCCCGGGCAGCTTTATTTGATCTTGCTTTTCCGGATAGCTTTAGTAGATTGCATGATAGGAGCAAGGAAACCCCCAAAGTGATGAAGCAACTTAACCGTCTTTTTCCAAACAAAGTATCAATACAGCTGCCTCAGGATGAGGCTTTGCTCTCTTATTGGAAGCAGCAGCTAGAACATGACATTGAAACTATGAAAGCTCAGTCTAATATTGTCAGCATTCGCACAGTTCTTGACAAGTTTGGATTTATTTGCCCTGATCTTGAAAATCTTTGCATTAATGATCAAACCCTAAGAACTGAAAGTGTGGAGAAAATTGTTGGCTGGGCATTAAGTTACCACCTAATGCATCCATCTGAAGAATCAACCAAAGACTCTATGATCGTGTTGTCTACTGAAAGCATTAAGTATGGGCTGAGCATTCTACAGGGTATCCAAGGAGAAAGCAAGAACTTAAAGAAATCACTGAAGGATGTAATTACTGAGAATGAATTTGAGAAAAAATTGCTTGCTGATGTTATTCCTCCAAGTGATGTTGGGGTCAAATTTGATGATATTGGAGCTTTAGAAAATGTGAAGGACACCTTGAATGAATTGGTCATGCTTCCCCTTCAGAGGCCTGAATTGTTTTCCAAAGGACAGTTGACCAAGCCTTGCAAGGGGATATTGCTTTTTGGGCCACCTGGTGTTGGAAAAACAATGCTTGCAAAGGCTGTAGCTACTGAGGCTGGAGCAAATTTCATCAACATCTCAATGTCCAGTATTACCTCAAAGTGGTTTGGTGAAGGAGAGAAATATGTCAAAGCAGTATTTTCTCTGGCAAGTAAAATTGCTCCAAGTGTTATTTTTGTTGATGAGGTTGATAGTATGTTAGGAAGACGTGAAAATCCTGGTGAGCATGAGGCTATGCGTAAAATGAAGAATGAATTTATGGTGAATTGGGATGGTCTGTGTACAAAAGACAATGAGCGCATACTCGTACTTGCTGCTACAAATCGACCCTTTGACCTTGATGAGGCTGTTATTAGGAGGCTTCCACGAAGATTAATGGTCAATTTGCCAGATGCTCTTAACAGAGAAAAAATTCTTAAAGTAATTTTAGCAAAAGAAGATCTGGCACCTGATGTCGATTTGGAAGCAATATCAAACATGACTGATGGATATTCTGGGAGTGACCTAAAGAATCTGTGCGTCTTAGCAGCTCACTGTCCAATAAGAGAGATATTGGAGAAGGAAAAGAAGGAGAGAAGTTTGGCACTGGCTGCGAATAGACCTTCACCTCCATTGTCTAGCAGTACTGACATTCGGCCCTTAAAGATGGAGGATTTTAGATATGCACTTGAGCAGGTGTGTGCAAGCGTGTCGTCAGAGTCAACAAATATGAACGAGCTGCTCCAATGGAATGACCTTTACGGGGAAGGTGGATCCAGAAAAATGAGATCTTTGAGCTATTTTCTGTGA | 3537 | 0.4275 | MVETRRGSSTSKRSHSSSSSSNVKRPKVPNDSSTRSLPSAEILGPVNEPGNESRETELNRSNLPDADSLKAMDVCDATLAEKSPAMAVVKGEVLTSPQPRGETVADGEKSKVVGAAAVRRSKKRSAKSTKTRPKAAWGRLLSQCSQNQHLSLWSSQFTVGHGRQCNLWLNDQAVSDVLCKLKLTKHGGSSVGLLEIIGDKGAVQVNGRNYKKNSSLILNAGDEVVFSSDKNAYIFQQLTNNDVAAARIPCSNAEASSKTSGHGDDTTDPNYTTNNGSPAEISAEKATLASSATANENFDLYSMKVDVGRLTGATRELRPLLCKLAGLCAEFNINDRFSKIFEQRESRELSKDVDPLTNLVYIRQQAFKNSLQQGILNPDDIDVSFKNFPYYISDPTKSALIASMHIHLKQNGFAKFASGLPSLCPRILLSGPPGSEIYQESLSKALAKHFGARLLVVDSFTLPGRTPSKDSDSTKQSSKPEKVYVSAKQSAQVATLQHNKPTSSVDADLIDESSLSSQVMLKQEVSTASSKGPMLKTAFRSHLDSSIVLIRGPRYGSRGKVLLAFQENESSKIGVRFDKPIPDGNDLGGLCEADRGFFCSANHLLRVDNFGGDDANKLAINEIFEVVFDQSKSGGLVLFLKDIEKAVIGNSDVLKSRLESLPQNVVVIGSHAQVDYRKDKTQPSSLLFTKFVSARAALFDLAFPDSFSRLHDRSKETPKVMKQLNRLFPNKVSIQLPQDEALLSYWKQQLEHDIETMKAQSNIVSIRTVLDKFGFICPDLENLCINDQTLRTESVEKIVGWALSYHLMHPSEESTKDSMIVLSTESIKYGLSILQGIQGESKNLKKSLKDVITENEFEKKLLADVIPPSDVGVKFDDIGALENVKDTLNELVMLPLQRPELFSKGQLTKPCKGILLFGPPGVGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLCTKDNERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDALNREKILKVILAKEDLAPDVDLEAISNMTDGYSGSDLKNLCVLAAHCPIREILEKEKKERSLALAANRPSPPLSSSTDIRPLKMEDFRYALEQVCASVSSESTNMNELLQWNDLYGEGGSRKMRSLSYFL | 1178 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci3g3445 | 1178 | Pfam | ATPase family associated with various cellular activities (AAA) | 914 | 1043 | IPR003959 | GO:0005524|GO:0016887 | |
Prci3g3445 | 1178 | Gene3D | - | 136 | 245 | - | - | |
Prci3g3445 | 1178 | PANTHER | AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED | 365 | 1177 | - | - | |
Prci3g3445 | 1178 | MobiDBLite | consensus disorder prediction | 254 | 278 | - | - | |
Prci3g3445 | 1178 | MobiDBLite | consensus disorder prediction | 1 | 66 | - | - | |
Prci3g3445 | 1178 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 873 | 1152 | IPR027417 | - | |
Prci3g3445 | 1178 | MobiDBLite | consensus disorder prediction | 11 | 40 | - | - | |
Prci3g3445 | 1178 | FunFam | p-loop nucleoside triphosphate hydrolase superfamily protein | 872 | 1048 | - | - | |
Prci3g3445 | 1178 | Pfam | AAA+ lid domain | 1067 | 1103 | IPR041569 | - | |
Prci3g3445 | 1178 | SMART | AAA_5 | 910 | 1047 | IPR003593 | GO:0016887 | |
Prci3g3445 | 1178 | SUPERFAMILY | SMAD/FHA domain | 137 | 235 | IPR008984 | GO:0005515 | |
Prci3g3445 | 1178 | Gene3D | - | 1046 | 1140 | - | - | |
Prci3g3445 | 1178 | ProSitePatterns | AAA-protein family signature. | 1017 | 1036 | IPR003960 | GO:0005524|GO:0016887 | |
Prci3g3445 | 1178 | Gene3D | - | 872 | 1152 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci3g3445 | Prci-Chr3 | 44654763 | 44668133 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci3g3445 | 870 | 1112 | Calmodulin-binding Proteins | AT3G56690 | 32.794 | 2.07e-30 | 128 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci3g3445 | - | - | gmx:100801477 | 1514.21 |