Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3445 ATGGTCGAAACTAGACGGGGCTCGTCCACTTCCAAGCGCTCTCACTCTTCATCCTCCTCTTCCAACGTCAAACGACCCAAGGTGCCCAACGATTCTTCGACAAGAAGTCTGCCGTCAGCGGAAATCCTTGGTCCGGTCAACGAACCTGGAAATGAATCCCGAGAGACGGAGCTAAATCGGTCTAACCTTCCAGATGCCGATTCGTTGAAAGCTATGGACGTTTGTGACGCGACGCTAGCTGAGAAATCTCCCGCCATGGCCGTCGTCAAAGGCGAGGTTTTGACATCGCCGCAGCCTCGAGGTGAAACTGTGGCGGATGGAGAGAAATCAAAGGTGGTTGGAGCGGCCGCCGTACGCCGGTCCAAGAAACGCTCAGCGAAATCAACTAAAACGAGGCCGAAGGCTGCATGGGGAAGGCTTCTTTCCCAGTGTTCCCAGAATCAACATCTGTCCTTGTGGAGTTCTCAATTCACTGTTGGTCATGGCCGTCAATGTAATTTATGGCTTAATGATCAAGCTGTTAGTGATGTTTTGTGCAAGTTGAAGCTCACCAAGCATGGAGGTTCATCTGTTGGATTACTGGAAATCATAGGGGATAAAGGTGCTGTCCAAGTTAATGGCAGGAATTACAAAAAAAATTCCAGCCTGATATTGAATGCAGGTGATGAGGTGGTTTTCAGTTCTGACAAGAATGCTTATATTTTTCAGCAGCTCACCAATAATGATGTCGCTGCTGCCAGGATACCTTGTTCTAATGCTGAGGCTTCATCAAAAACTTCTGGCCATGGGGATGATACTACCGACCCAAATTATACCACCAATAATGGCAGTCCAGCTGAAATTTCTGCTGAGAAAGCTACTCTTGCATCCTCTGCCACTGCCAATGAAAATTTTGACCTTTACAGTATGAAAGTGGATGTTGGGAGGTTGACAGGAGCCACACGTGAGTTAAGGCCTTTGTTGTGCAAGCTCGCTGGCCTGTGTGCTGAATTCAATATAAATGATAGGTTTTCCAAAATATTTGAACAAAGAGAATCAAGAGAACTCTCCAAGGATGTTGATCCTCTAACTAATTTAGTTTACATCAGGCAGCAAGCATTCAAAAACAGTTTACAACAAGGAATTCTCAATCCTGATGATATTGATGTGTCATTCAAAAATTTCCCGTATTATATAAGTGATCCTACAAAAAGTGCTCTGATTGCTTCTATGCACATTCATTTGAAGCAAAATGGTTTTGCAAAGTTTGCTTCAGGCCTACCTTCACTGTGCCCCCGAATATTGTTATCTGGTCCTCCAGGTTCTGAAATATATCAGGAATCCTTGTCCAAGGCACTTGCAAAGCATTTTGGTGCTAGGCTATTAGTTGTGGATTCTTTCACCCTGCCTGGTAGAACACCATCAAAGGATTCTGATTCTACCAAGCAAAGTTCAAAGCCTGAAAAAGTGTATGTTTCTGCAAAACAGAGTGCCCAGGTTGCCACATTGCAGCATAATAAACCAACTTCAAGTGTCGATGCTGATCTTATTGATGAATCCTCATTAAGTTCTCAGGTTATGCTGAAGCAGGAGGTATCTACTGCATCATCCAAAGGCCCTATGCTTAAAACAGCCTTCAGGTCTCATCTTGATTCTTCTATTGTGCTCATTAGAGGACCGAGGTATGGCTCCCGTGGCAAAGTTCTTCTTGCTTTTCAAGAAAATGAGTCTTCAAAAATTGGGGTTAGATTCGACAAACCAATTCCAGATGGGAATGATCTTGGAGGGCTATGTGAAGCTGATCGTGGTTTTTTTTGTTCTGCTAATCATTTACTACGAGTAGATAACTTTGGAGGGGATGACGCCAACAAGCTTGCTATTAATGAAATCTTTGAGGTTGTCTTTGATCAGAGTAAAAGTGGTGGGTTGGTGTTGTTCTTGAAAGATATAGAGAAGGCTGTGATAGGGAACTCAGACGTCTTAAAAAGCAGGCTTGAAAGTTTGCCACAAAATGTTGTTGTAATTGGCTCACATGCCCAAGTGGACTACCGCAAGGACAAGACCCAGCCTAGTAGCCTTCTGTTCACAAAATTTGTGAGCGCCCGGGCAGCTTTATTTGATCTTGCTTTTCCGGATAGCTTTAGTAGATTGCATGATAGGAGCAAGGAAACCCCCAAAGTGATGAAGCAACTTAACCGTCTTTTTCCAAACAAAGTATCAATACAGCTGCCTCAGGATGAGGCTTTGCTCTCTTATTGGAAGCAGCAGCTAGAACATGACATTGAAACTATGAAAGCTCAGTCTAATATTGTCAGCATTCGCACAGTTCTTGACAAGTTTGGATTTATTTGCCCTGATCTTGAAAATCTTTGCATTAATGATCAAACCCTAAGAACTGAAAGTGTGGAGAAAATTGTTGGCTGGGCATTAAGTTACCACCTAATGCATCCATCTGAAGAATCAACCAAAGACTCTATGATCGTGTTGTCTACTGAAAGCATTAAGTATGGGCTGAGCATTCTACAGGGTATCCAAGGAGAAAGCAAGAACTTAAAGAAATCACTGAAGGATGTAATTACTGAGAATGAATTTGAGAAAAAATTGCTTGCTGATGTTATTCCTCCAAGTGATGTTGGGGTCAAATTTGATGATATTGGAGCTTTAGAAAATGTGAAGGACACCTTGAATGAATTGGTCATGCTTCCCCTTCAGAGGCCTGAATTGTTTTCCAAAGGACAGTTGACCAAGCCTTGCAAGGGGATATTGCTTTTTGGGCCACCTGGTGTTGGAAAAACAATGCTTGCAAAGGCTGTAGCTACTGAGGCTGGAGCAAATTTCATCAACATCTCAATGTCCAGTATTACCTCAAAGTGGTTTGGTGAAGGAGAGAAATATGTCAAAGCAGTATTTTCTCTGGCAAGTAAAATTGCTCCAAGTGTTATTTTTGTTGATGAGGTTGATAGTATGTTAGGAAGACGTGAAAATCCTGGTGAGCATGAGGCTATGCGTAAAATGAAGAATGAATTTATGGTGAATTGGGATGGTCTGTGTACAAAAGACAATGAGCGCATACTCGTACTTGCTGCTACAAATCGACCCTTTGACCTTGATGAGGCTGTTATTAGGAGGCTTCCACGAAGATTAATGGTCAATTTGCCAGATGCTCTTAACAGAGAAAAAATTCTTAAAGTAATTTTAGCAAAAGAAGATCTGGCACCTGATGTCGATTTGGAAGCAATATCAAACATGACTGATGGATATTCTGGGAGTGACCTAAAGAATCTGTGCGTCTTAGCAGCTCACTGTCCAATAAGAGAGATATTGGAGAAGGAAAAGAAGGAGAGAAGTTTGGCACTGGCTGCGAATAGACCTTCACCTCCATTGTCTAGCAGTACTGACATTCGGCCCTTAAAGATGGAGGATTTTAGATATGCACTTGAGCAGGTGTGTGCAAGCGTGTCGTCAGAGTCAACAAATATGAACGAGCTGCTCCAATGGAATGACCTTTACGGGGAAGGTGGATCCAGAAAAATGAGATCTTTGAGCTATTTTCTGTGA 3537 0.4275 MVETRRGSSTSKRSHSSSSSSNVKRPKVPNDSSTRSLPSAEILGPVNEPGNESRETELNRSNLPDADSLKAMDVCDATLAEKSPAMAVVKGEVLTSPQPRGETVADGEKSKVVGAAAVRRSKKRSAKSTKTRPKAAWGRLLSQCSQNQHLSLWSSQFTVGHGRQCNLWLNDQAVSDVLCKLKLTKHGGSSVGLLEIIGDKGAVQVNGRNYKKNSSLILNAGDEVVFSSDKNAYIFQQLTNNDVAAARIPCSNAEASSKTSGHGDDTTDPNYTTNNGSPAEISAEKATLASSATANENFDLYSMKVDVGRLTGATRELRPLLCKLAGLCAEFNINDRFSKIFEQRESRELSKDVDPLTNLVYIRQQAFKNSLQQGILNPDDIDVSFKNFPYYISDPTKSALIASMHIHLKQNGFAKFASGLPSLCPRILLSGPPGSEIYQESLSKALAKHFGARLLVVDSFTLPGRTPSKDSDSTKQSSKPEKVYVSAKQSAQVATLQHNKPTSSVDADLIDESSLSSQVMLKQEVSTASSKGPMLKTAFRSHLDSSIVLIRGPRYGSRGKVLLAFQENESSKIGVRFDKPIPDGNDLGGLCEADRGFFCSANHLLRVDNFGGDDANKLAINEIFEVVFDQSKSGGLVLFLKDIEKAVIGNSDVLKSRLESLPQNVVVIGSHAQVDYRKDKTQPSSLLFTKFVSARAALFDLAFPDSFSRLHDRSKETPKVMKQLNRLFPNKVSIQLPQDEALLSYWKQQLEHDIETMKAQSNIVSIRTVLDKFGFICPDLENLCINDQTLRTESVEKIVGWALSYHLMHPSEESTKDSMIVLSTESIKYGLSILQGIQGESKNLKKSLKDVITENEFEKKLLADVIPPSDVGVKFDDIGALENVKDTLNELVMLPLQRPELFSKGQLTKPCKGILLFGPPGVGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLCTKDNERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDALNREKILKVILAKEDLAPDVDLEAISNMTDGYSGSDLKNLCVLAAHCPIREILEKEKKERSLALAANRPSPPLSSSTDIRPLKMEDFRYALEQVCASVSSESTNMNELLQWNDLYGEGGSRKMRSLSYFL 1178
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3445 1178 Pfam ATPase family associated with various cellular activities (AAA) 914 1043 IPR003959 GO:0005524|GO:0016887
Prci3g3445 1178 Gene3D - 136 245 - -
Prci3g3445 1178 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 365 1177 - -
Prci3g3445 1178 MobiDBLite consensus disorder prediction 254 278 - -
Prci3g3445 1178 MobiDBLite consensus disorder prediction 1 66 - -
Prci3g3445 1178 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 873 1152 IPR027417 -
Prci3g3445 1178 MobiDBLite consensus disorder prediction 11 40 - -
Prci3g3445 1178 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 872 1048 - -
Prci3g3445 1178 Pfam AAA+ lid domain 1067 1103 IPR041569 -
Prci3g3445 1178 SMART AAA_5 910 1047 IPR003593 GO:0016887
Prci3g3445 1178 SUPERFAMILY SMAD/FHA domain 137 235 IPR008984 GO:0005515
Prci3g3445 1178 Gene3D - 1046 1140 - -
Prci3g3445 1178 ProSitePatterns AAA-protein family signature. 1017 1036 IPR003960 GO:0005524|GO:0016887
Prci3g3445 1178 Gene3D - 872 1152 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Prci3g3445 Prci-Chr3 44654763 44668133 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3445 870 1112 Calmodulin-binding Proteins AT3G56690 32.794 2.07e-30 128
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3445 - - gmx:100801477 1514.21