Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3361 ATGAATATCACTACCCGTCAGCAATTCGAAACGTTTGTTCCCAAGCCAGTTCTTCAAGATGTGCGGTTGAATTGCAATCACTCGCTTGCGCATAACTCCTCTTGCTCTCTTTGTATTAACAGCTTGTCCAAGCTATCTGCTTCGTACTTGAGCGGACCGTCGATTGGAAACGTCTCCACTTGCAGGGACTATTCATCAATTTATGCTGCTGCAATCGTCAATCAATATGGACCCACCGACTCTGGGACTGCTAAGTGCTTGTTCTCCATGGATCTTGAACCTGCGAGCTCCAATCGTAGGGTGGAACGGATTGTTATTGCCCTTGCTTCCGTTGTTTGCGTGTTGGGCTTGTTATTCGTGATTGGTGGGTTCTGGCTTTGCCGGAGAGGATTGAAGAAGAATAAGATAATGAGAAAGCACAATATTAGCAGAATTAAGACGGGGTTAGATTCCGGGTTGAATTCCTTGAATGAGAGCACGACCTTAATCAGGTTCACATTCGATGACATTAAGAAGGCTACTAGGAACTTCAACCCGGGCAACGTTATTGGGAGAGGAGGATATGGGAATGTGTATAACGGAGTGTTGCCCGATGGGAGTGAAGTTGCATTGAAAAGATTCAAGAACTGTTCGGCTGCAGGGGATGCGAGTTTCGCTCACGAAGTTGAGGTTATAGCAAGTGTGAGGCATGTAAACCTCGTTGCGTTGAGAGGTTTTTGCACTGCCACAACTAATTTAGAGGGTCACCAGAGGATTATCGTCTGTGAGTTGATGAAGAATGGGAGTCTTCACGATCATTTGTTCGGTTCTATGTGTAAGAAACTCAGTTGGCCAACCCGTCAAAAGATTGCACTGGGGACTGCAAGAGGACTGACTTATCTGCATTACGGGGCTCAGCCAGTTATCATCCATAGGGATATAAAAGCCAGCAATATACTTCTGGACGAGAAATTTGAAGCCAAGGTCGCAGACTTTGGACTTGCAAAGTTCTACCCTGAGGGAATGACGCATATGAGCACTAGGATAGCTGGAACCATGGGGTATGTGGCTCCCGAGTATGCATTGTATGGACAGTTAACGGAAAGAAGTGATGTTTTCAGTTATGGTGTTGTGCTTCTTGAACTTTTGAGTGGGAAGAAGGGTCTTGAAATGAACCATGATGGCCAACCTTCTGCTCTCTCTGACTGGGCTTGGTCATTGGTAAGAACAGGTCGACCTTTGGACGTTATTGAAGATGGTATGCCAGAAACTGGTGCTCCACATGTCATGGAGAAGTATGTGTTGGTTGCTGTAGTTTGCTCTCATCCACAGTTATATGCGAGGCCAACAATGGACCAGGTGGTTAAGATGTTGGAGTCAGATGAATCAGTGCCCGCTATACCCGAAAGACCGCTTCCTCTGGTTGCTAGGAGGAGTGATATCGAGAGATCTATCAGTAATTGTGGTTCGGTTCAGCTTTATAGTCCAACTGGTTATCAATCATATGCATTTGACGGTGACCGTCATTCTTCTTTTAATTCTAATTAA 1527 0.4551 MNITTRQQFETFVPKPVLQDVRLNCNHSLAHNSSCSLCINSLSKLSASYLSGPSIGNVSTCRDYSSIYAAAIVNQYGPTDSGTAKCLFSMDLEPASSNRRVERIVIALASVVCVLGLLFVIGGFWLCRRGLKKNKIMRKHNISRIKTGLDSGLNSLNESTTLIRFTFDDIKKATRNFNPGNVIGRGGYGNVYNGVLPDGSEVALKRFKNCSAAGDASFAHEVEVIASVRHVNLVALRGFCTATTNLEGHQRIIVCELMKNGSLHDHLFGSMCKKLSWPTRQKIALGTARGLTYLHYGAQPVIIHRDIKASNILLDEKFEAKVADFGLAKFYPEGMTHMSTRIAGTMGYVAPEYALYGQLTERSDVFSYGVVLLELLSGKKGLEMNHDGQPSALSDWAWSLVRTGRPLDVIEDGMPETGAPHVMEKYVLVAVVCSHPQLYARPTMDQVVKMLESDESVPAIPERPLPLVARRSDIERSISNCGSVQLYSPTGYQSYAFDGDRHSSFNSN 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3361 508 Pfam SPARK 1 58 IPR043891 -
Prci3g3361 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 302 314 IPR008271 GO:0004672|GO:0006468
Prci3g3361 508 ProSiteProfiles Protein kinase domain profile. 177 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g3361 508 Gene3D Phosphorylase Kinase; domain 1 140 256 - -
Prci3g3361 508 SUPERFAMILY Protein kinase-like (PK-like) 160 476 IPR011009 -
Prci3g3361 508 Gene3D Transferase(Phosphotransferase) domain 1 258 459 - -
Prci3g3361 508 SMART serkin_6 177 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g3361 508 Pfam Protein kinase domain 180 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g3361 508 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 258 459 - -
Prci3g3361 508 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 49 473 - -
Prci3g3361 508 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 138 256 - -
Prci3g3361 508 ProSitePatterns Protein kinases ATP-binding region signature. 183 205 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3361 Prci-Chr3 44257011 44258998 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3361 1 500 Receptor kinase-like Gene Family AT2G48010 65.209 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Prci3g3361 Pkinase 1.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3361 - - qsa:O6P43_007088 700.279