Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3360 ATGTCTCTTTCCTTCCTCATCGTGGTCCTCCTCGCTTTCTCACGCCCTTACCTCTCCGCAAACAACGGGCCTTGCCCCCTCAAATTCACCATCCTCCGCGACGTCACCGGCTGGCTCAGACTACCTCGTGATCCCGCTACCCACTGCCAGCACGTCCGCAACGCCCTCCATCTTGTTCAGTCCGATTACCTCCGTCGCTCTGGTGATTTCTTCCTCCCTGCTCTCGACTCTTCTGAGTCCTGCTGGCATGATTTCCACTCTTACACTCATCAATTTGACTCCAACTTTGATATTCGCTTCTCTTGTGGATTCCAAAGCAGCTGGATCTCCCAAGGATGCATGAATATCACTACCCGTCAGCAATTCGAAACGTTTGTTCCCAAGCCAGTTCTTCAAGATGTGCGGTTGAATTGCAATCACTCGCTTGCGCATAACTCCTCTTGCTCTCTTTGTATTAACAGCTTGTCCAAGCTATCTGCTTCGTACTTGAGCGGACCGTCGATTGGAAACGTCTCCACTTGCAGGGACTATTCATCAATTTATGCTGCTGCAATCGTCAATCAATATGGACCCACCGACTCTGGGACTGCTAAGTGCTTGTTCTCCATGGATCTTGAACCTGCGAGCTCCAATCGTAGGGTGGAACGGATTGTTATTGCCCTTGCTTCCGTTGTTTGCGTGTTGGGCTTGTTATTCGTGATTGGTGGGTTCTGGCTTTGCCGGAGAGGATTGAAGAAGAATAAGATAATGAGAAAGCACAATATTAGCAGAATTAAGACGGGGTTAGATTCCGGGTTGAATTCCTTGAATGAGAGCACGACCTTAATCAGGTTCACATTCGATGACATTAAGAAGGCTACTAGGAACTTCAACCCGGGCAACGTTATTGGGAGAGGAGGATATGGGAATGTGTATAACGGAGTGTTGCCCGATGGGAGTGAAGTTGCATTGAAAAGATTCAAGAACTGTTCGGCTGCAGGGGATGCGAGTTTCGCTCACGAAGTTGAGGTTATAGCAAGTGTGAGGCATGTAAACCTCGTTGCGTTGAGAGGTTTTTGCACTGCCACAACTAATTTAGAGGGTCACCAGAGGATTATCGTCTGTGAGTTGATGAAGAATGGGAGTCTTCACGATCATTTGTTCGGTTCTATGTGTAAGAAACTCAGTTGGCCAACCCGTCAAAAGATTGCACTGGGGACTGCAAGAGGACTGACTTATCTGCATTACGGGGCTCAGCCAGTTATCATCCATAGGGATATAAAAGCCAGCAATATACTTCTGGACGAGAAATTTGAAGCCAAGGTCGCAGACTTTGGACTTGCAAAGTTCTACCCTGAGGGAATGACGCATATGAGCACTAGGATAGCTGGAACCATGGGGTATGTGGCTCCCGAGTATGCATTGTATGGACAGTTAACGGAAAGAAGTGATGTTTTCAGTTATGGTGTTGTGCTTCTTGAACTTTTGAGTGGGAAGAAGGGTCTTGAAATGAACCATGATGGCCAACCTTCTGCTCTCTCTGACTGGGCTTGGTCATTGGTAAGAACAGGTCGACCTTTGGACGTTATTGAAGATGGTATGCCAGAAACTGGTGCTCCACATGTCATGGAGAAGTATGTGTTGGTTGCTGTAGTTTGCTCTCATCCACAGTTATATGCGAGGCCAACAATGGACCAGGTGGTTAAGATGTTGGAGTCAGATGAATCAGTGCCCGCTATACCCGAAAGACCGCTTCCTCTGGTTGCTAGGAGGAGTGATATCGAGAGATCTATCAGTAATTGTGGTTCGGTTCAGCTTTATAGTCCAACTGGTTATCAATCATATGCATTTGACGGTGACCGTCATTCTTCTTTTAATTCTAATTAA 1866 0.4711 MSLSFLIVVLLAFSRPYLSANNGPCPLKFTILRDVTGWLRLPRDPATHCQHVRNALHLVQSDYLRRSGDFFLPALDSSESCWHDFHSYTHQFDSNFDIRFSCGFQSSWISQGCMNITTRQQFETFVPKPVLQDVRLNCNHSLAHNSSCSLCINSLSKLSASYLSGPSIGNVSTCRDYSSIYAAAIVNQYGPTDSGTAKCLFSMDLEPASSNRRVERIVIALASVVCVLGLLFVIGGFWLCRRGLKKNKIMRKHNISRIKTGLDSGLNSLNESTTLIRFTFDDIKKATRNFNPGNVIGRGGYGNVYNGVLPDGSEVALKRFKNCSAAGDASFAHEVEVIASVRHVNLVALRGFCTATTNLEGHQRIIVCELMKNGSLHDHLFGSMCKKLSWPTRQKIALGTARGLTYLHYGAQPVIIHRDIKASNILLDEKFEAKVADFGLAKFYPEGMTHMSTRIAGTMGYVAPEYALYGQLTERSDVFSYGVVLLELLSGKKGLEMNHDGQPSALSDWAWSLVRTGRPLDVIEDGMPETGAPHVMEKYVLVAVVCSHPQLYARPTMDQVVKMLESDESVPAIPERPLPLVARRSDIERSISNCGSVQLYSPTGYQSYAFDGDRHSSFNSN 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3360 621 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 251 369 - -
Prci3g3360 621 Gene3D Phosphorylase Kinase; domain 1 253 369 - -
Prci3g3360 621 Pfam Protein kinase domain 293 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g3360 621 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 143 586 - -
Prci3g3360 621 SMART serkin_6 290 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g3360 621 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 371 572 - -
Prci3g3360 621 ProSitePatterns Protein kinases ATP-binding region signature. 296 318 IPR017441 GO:0005524
Prci3g3360 621 SUPERFAMILY Protein kinase-like (PK-like) 273 588 IPR011009 -
Prci3g3360 621 Gene3D Transferase(Phosphotransferase) domain 1 371 572 - -
Prci3g3360 621 ProSiteProfiles Protein kinase domain profile. 290 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g3360 621 Pfam SPARK 20 171 IPR043891 -
Prci3g3360 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3360 Prci-Chr3 44257011 44259260 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3360 6 621 Receptor kinase-like Gene Family AT2G48010 60.645 0.0 756
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Prci3g3360 Pkinase 2.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3360 - - gmx:100800760 784.252