Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3359 ATGTCTCTTTCCTTCCTCATCGTGGTCCTCCTCGCTTTCTCACGCCCTTACCTCTCCGCAAACAACGGGCCTTGCCCCCTCAAATTCACCATCCTCCGCGACGTCACCGGCTGGCTCAGACTACCTCGTGATCCCGCTACCCACTGCCAGCACGTCCGCAACGCCCTCCATCTTGTTCAGTCCGATTACCTCCGTCGCTCTGGTGATTTCTTCCTCCCTGCTCTCGACTCTTCTGAGTCCTGCTGGCATGATTTCCACTCTTACACTCATCAATTTGACTCCAACTTTGATATTCGCTTCTCTTGTGGATTCCAAAGCAGCTGGATCTCCCAAGGATGCATGAATATCACTACCCGTCAGCAATTCGAAACCTTGTCCAAGCTATCTGCTTCGTACTTGAGCGGACCGTCGATTGGAAACGTCTCCACTTGCAGGGACTATTCATCAATTTATGCTGCTGCAATCGTCAATCAATATGGACCCACCGACTCTGGGACTGCTAAGTGCTTGTTCTCCATGGATCTTGAACCTGCGAGCTCCAATCGTAGGGTGGAACGGATTGTTATTGCCCTTGCTTCCGTTGTTTGCGTGTTGGGCTTGTTATTCGTGATTGGTGGGTTCTGGCTTTGCCGGAGAGGATTGAAGAAGAATAAGATAATGAGAAAGCACAATATTAGCAGAATTAAGACGGGGTTAGATTCCGGGTTGAATTCCTTGAATGAGAGCACGACCTTAATCAGGTTCACATTCGATGACATTAAGAAGGCTACTAGGAACTTCAACCCGGGCAACGTTATTGGGAGAGGAGGATATGGGAATGTGTATAACGGAGTGTTGCCCGATGGGAGTGAAGTTGCATTGAAAAGATTCAAGAACTGTTCGGCTGCAGGGGATGCGAGTTTCGCTCACGAAGTTGAGGTTATAGCAAGTGTGAGGCATGTAAACCTCGTTGCGTTGAGAGGTTTTTGCACTGCCACAACTAATTTAGAGGGTCACCAGAGGATTATCGTCTGTGAGTTGATGAAGAATGGGAGTCTTCACGATCATTTGTTCGGTTCTATGTGTAAGAAACTCAGTTGGCCAACCCGTCAAAAGATTGCACTGGGGACTGCAAGAGGACTGACTTATCTGCATTACGGGGCTCAGCCAGTTATCATCCATAGGGATATAAAAGCCAGCAATATACTTCTGGACGAGAAATTTGAAGCCAAGGTCGCAGACTTTGGACTTGCAAAGTTCTACCCTGAGGGAATGACGCATATGAGCACTAGGATAGCTGGAACCATGGGGTATGTGGCTCCCGAGTATGCATTGTATGGACAGTTAACGGAAAGAAGTGATGTTTTCAGTTATGGTGTTGTGCTTCTTGAACTTTTGAGTGGGAAGAAGGGTCTTGAAATGAACCATGATGGCCAACCTTCTGCTCTCTCTGACTGGGCTTGGTCATTGGTAAGAACAGGTCGACCTTTGGACGTTATTGAAGATGGTATGCCAGAAACTGGTGCTCCACATGTCATGGAGAAGTATGTGTTGGTTGCTGTAGTTTGCTCTCATCCACAGTTATATGCGAGGCCAACAATGGACCAGGTGGTTAAGATGTTGGAGTCAGATGAATCAGTGCCCGCTATACCCGAAAGACCGCTTCCTCTGGTTGCTAGGAGGAGTGATATCGAGAGATCTATCAGTAATTGTGGTTCGGTTCAGCTTTATAGTCCAACTGGTTATCAATCATATGCATTTGACGGTGACCGTCATTCTTCTTTTAATTCTAATTAA 1776 0.4724 MSLSFLIVVLLAFSRPYLSANNGPCPLKFTILRDVTGWLRLPRDPATHCQHVRNALHLVQSDYLRRSGDFFLPALDSSESCWHDFHSYTHQFDSNFDIRFSCGFQSSWISQGCMNITTRQQFETLSKLSASYLSGPSIGNVSTCRDYSSIYAAAIVNQYGPTDSGTAKCLFSMDLEPASSNRRVERIVIALASVVCVLGLLFVIGGFWLCRRGLKKNKIMRKHNISRIKTGLDSGLNSLNESTTLIRFTFDDIKKATRNFNPGNVIGRGGYGNVYNGVLPDGSEVALKRFKNCSAAGDASFAHEVEVIASVRHVNLVALRGFCTATTNLEGHQRIIVCELMKNGSLHDHLFGSMCKKLSWPTRQKIALGTARGLTYLHYGAQPVIIHRDIKASNILLDEKFEAKVADFGLAKFYPEGMTHMSTRIAGTMGYVAPEYALYGQLTERSDVFSYGVVLLELLSGKKGLEMNHDGQPSALSDWAWSLVRTGRPLDVIEDGMPETGAPHVMEKYVLVAVVCSHPQLYARPTMDQVVKMLESDESVPAIPERPLPLVARRSDIERSISNCGSVQLYSPTGYQSYAFDGDRHSSFNSN 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3359 591 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 221 339 - -
Prci3g3359 591 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 341 542 - -
Prci3g3359 591 Gene3D Phosphorylase Kinase; domain 1 223 339 - -
Prci3g3359 591 ProSitePatterns Protein kinases ATP-binding region signature. 266 288 IPR017441 GO:0005524
Prci3g3359 591 ProSiteProfiles Protein kinase domain profile. 260 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g3359 591 Pfam Protein kinase domain 263 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g3359 591 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 129 556 - -
Prci3g3359 591 Gene3D Transferase(Phosphotransferase) domain 1 341 542 - -
Prci3g3359 591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 385 397 IPR008271 GO:0004672|GO:0006468
Prci3g3359 591 SMART serkin_6 260 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g3359 591 Pfam SPARK 20 131 IPR043891 -
Prci3g3359 591 SUPERFAMILY Protein kinase-like (PK-like) 243 558 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3359 Prci-Chr3 44257011 44259261 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3359 6 591 Receptor kinase-like Gene Family AT2G48010 59.451 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Prci3g3359 Pkinase 2.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3359 - - gmx:100800760 742.651