Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3341 ATGAAGATGGTCCCTTGGGGTGGAGTCAGTTGCTGTTTGAGTGCGGCTGCTCTTTACCTTCTCGGTAGAAGTAGTGGCAGAGATGCCGAAATTCTTAAATCCGTTAACCGTGTCAATCAGTTAAAGGAATTAGCGCAACTGTTAGATGGTGAAATATTACCACTGGTTGTTGCAATTTCCGGAAGAGTTGGCTCTGAAACCCCAGTCAACTGTGAATTCAGTGGTCTGAGGGGTGTAATAGTTGAAGAAACGGCAGAGCAACATTTTCTTAAACACAATGATGCTGGTTCGTGGATACAAGATTCTGCTTTGATGCTATCCATGAGCAAAGAAGTTCCTTGGTATCTGGATGATGGAACTGGTCATGTTCACGTGATTGGAGCTAGGGGCGCTACAGGTTTTGTATTACCTGTTGGAAGTGAAGCATTTGAAGAGTCAGGTCGATCACTTGTACGTGGAACATTAGATTATCTCCAAGGTCTCAAGGCTGCTAAGGATGACATTGGAACCATCCGAATTCAGCGACCCCACAAAGGACCATTTTATGTCTCTCCAAAAACAATTGATCAGCTTATTGCCAATCTAGGAAAATGGGCAAGGTGGTATAAGTATGCATCTGTGGGCTTGACCCTCTTTGGTGCTTATTTAATGGCCAAGCATGCTATTCAGTACATCTTGGAAAGACGACGCCGTTGTGAACTACAAAAGAGGGTTCTTGCTGCAGCTGCTAAGAGGTCAGGACAAGATAGTGAAGGTGAAAAGGCTGACAGTTTACCGGATGGTGCAAAAAGAGATCGCATAATGCCAGATTTATGTGTGATATGCCTTGAGCATGAGTATAATGCTGTTTTTGTTCCGTGTGGGCATATGTGCTGCTGTACAGCTTGCTCTTCCCACTTAACCAACTGTCCTCTGTGCCGGGGGCGGATAGAGCAGGTAGTGAAGACATATCGTCATTAA 960 0.4479 MKMVPWGGVSCCLSAAALYLLGRSSGRDAEILKSVNRVNQLKELAQLLDGEILPLVVAISGRVGSETPVNCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGTGHVHVIGARGATGFVLPVGSEAFEESGRSLVRGTLDYLQGLKAAKDDIGTIRIQRPHKGPFYVSPKTIDQLIANLGKWARWYKYASVGLTLFGAYLMAKHAIQYILERRRRCELQKRVLAAAAKRSGQDSEGEKADSLPDGAKRDRIMPDLCVICLEHEYNAVFVPCGHMCCCTACSSHLTNCPLCRGRIEQVVKTYRH 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3341 319 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 243 318 IPR013083 -
Prci3g3341 319 ProSiteProfiles Zinc finger RING-type profile. 272 307 IPR001841 -
Prci3g3341 319 SUPERFAMILY RING/U-box 271 313 - -
Prci3g3341 319 CDD RING-HC_LRSAM1 272 315 - -
Prci3g3341 319 FunFam E3 ubiquitin-protein ligase SP1 260 318 - -
Prci3g3341 319 Pfam Zinc finger, C3HC4 type (RING finger) 270 313 - -
Prci3g3341 319 Pfam E3 Ubiquitin ligase 164 213 IPR022170 GO:0004842|GO:0006996|GO:0016567
Prci3g3341 319 Pfam E3 Ubiquitin ligase 87 158 IPR022170 GO:0004842|GO:0006996|GO:0016567
Prci3g3341 319 PANTHER - 2 163 IPR044231 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3341 Prci-Chr3 44159904 44163666 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3341 3 252 C3H Transcription Factor Family AT1G63900 70.803 2.37e-137 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3341 K15688 - gmx:100803252 572.007