Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3308 ATGCGAGGCATAGTTGGAAGTAAGCTCAACCTGTGTTTCTCAAAGATGATGCGACCATTTTCACCTGAATCTCCTCCGAATTCCACCAGCCTTAACTCAGGGTCATCCCCAGATGACCACCCCTCCTCGTCGTCCTCGTCCTCGATTTTGGTAAAGAACTTCAATTCGCTCTACGATCACACCTTTGACCCTTACGAGCCCGAAGCCGAACCCGCTGACTTGGCCACCGCTTTTGCCTCCGAACGATTCTTCTTCTCGTCTCCTGGTCGCTCCAACTCTATCATCCAATTGCCGTCATCGCCATCAGCCCCTGAAAGCCCCCATACCAACAAGCTCTTCACAAACAGCGTGGCCGTGCCGACGTACTCGCCTGACCCTTATATGGACTTCCGACGATCTATGCAGGAGATGGTGGAGGCGCGTCCCGAGCTGATGGATGTCAAGTCCAAATGGGAAATGTTACAGGAGCTTCTCCTTTGCTATCTCGCTCTGAATCCACGGACCACCCACAAGTTCATCGTGGGCGCTTTTGCAGATCTTCTTGTCACCCTCACGTTTCCGCCGCAGGAGGCGGCCGCCGGCGTGGCAGCATGTGGAAGGAGTTAA 606 0.5413 MRGIVGSKLNLCFSKMMRPFSPESPPNSTSLNSGSSPDDHPSSSSSSSILVKNFNSLYDHTFDPYEPEAEPADLATAFASERFFFSSPGRSNSIIQLPSSPSAPESPHTNKLFTNSVAVPTYSPDPYMDFRRSMQEMVEARPELMDVKSKWEMLQELLLCYLALNPRTTHKFIVGAFADLLVTLTFPPQEAAAGVAACGRS 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3308 201 ProSiteProfiles OVATE domain profile. 119 183 IPR006458 -
Prci3g3308 201 Pfam Transcriptional repressor, ovate 123 184 IPR006458 -
Prci3g3308 201 MobiDBLite consensus disorder prediction 21 47 - -
Prci3g3308 201 MobiDBLite consensus disorder prediction 20 47 - -
Prci3g3308 201 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 44 184 IPR038933 GO:0045892
Prci3g3308 201 NCBIfam uncharacterized plant-specific domain TIGR01568 117 185 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3308 Prci-Chr3 43920270 43922082 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Prci3g3308 Ovate 8.7e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3308 - - pcin:129295641 210.69