LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci3g3302	ATGGCGATTGAAGCGGACACAAGAAGTAGTAGTTCTCTCATTCTGCTGAAGCAAGGAGCTGAAGCTAGGGTTTTTGAGTCTGATTTTGTTGGAAGGAGGTCTGTTGTGAAAGAGCGCTTCTCTAAGAAGTACAGGCATCCAATTTTGGATTCTAAACTTACTCTAAAGCGATTAAATGCGGAGGCCAGGTGCACGACCAAGGCAAGACGGCTTGGGGTTTGTACTCCAGTGCTGTATGCTGTGGATCCTGTGTCACAAACGTTAACGTTCGAATTTGTTGAAGGACCTTCAGTGAAAGATGTATTTCTTGAATTTGGGTTACATGGTGTCAATGAAAAGCAGTTGGAAGATATTTCATCCCAAATTGGTGATGCAATTGGAAAAATACATGATGGTGGCCTAATTCATGGCGACTTGACCACCTCTAATATGCTGCTGAAGAATGGCTCCAATCAGTTGGTCCTCATTGACTTTGGTTTGAGCTTCACTTCAACTCTACCAGAAGATAAAGCTGTTGATTTGTATGTTTTGGAAAGAGCTCTTCTTTCAATGCACTCTTCATGTGGCAATGTGATGGACCGGATACTTGCTGCATATCGCAAATCGTCAAAGCAGTGGTCATCCACATTAAACAAGCTGGCGCAAGTGCGACAAAGAGGACGGAAGAGGACCATGGTTGGATGA	684	0.4371	MAIEADTRSSSSLILLKQGAEARVFESDFVGRRSVVKERFSKKYRHPILDSKLTLKRLNAEARCTTKARRLGVCTPVLYAVDPVSQTLTFEFVEGPSVKDVFLEFGLHGVNEKQLEDISSQIGDAIGKIHDGGLIHGDLTTSNMLLKNGSNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSMHSSCGNVMDRILAAYRKSSKQWSSTLNKLAQVRQRGRKRTMVG	227

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci3g3302	227	Gene3D	Phosphorylase Kinase; domain 1	21	93	-	-
	Prci3g3302	227	NCBIfam	KEOPS complex kinase/ATPase Bud32	19	221	IPR022495	GO:0004674
	Prci3g3302	227	Pfam	Protein kinase domain	56	162	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci3g3302	227	SMART	serkin_6	10	226	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci3g3302	227	ProSitePatterns	Tyrosine protein kinases specific active-site signature.	134	146	IPR008266	GO:0004672\|GO:0006468
	Prci3g3302	227	Gene3D	Transferase(Phosphotransferase) domain 1	107	224	-	-
	Prci3g3302	227	SUPERFAMILY	Protein kinase-like (PK-like)	16	175	IPR011009	-
	Prci3g3302	227	PANTHER	NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE	5	227	IPR022495	GO:0004674
	Prci3g3302	227	ProSiteProfiles	Protein kinase domain profile.	10	227	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci3g3302	227	FunFam	TP53-regulating kinase isoform X1	21	93	-	-
	Prci3g3302	227	FunFam	Protein kinase superfamily protein	108	224	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci3g3302	Prci-Chr3	43857673	43860767	Tandem

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_CDKL-Os	Prci3g3302		Pkinase	1.6e-10	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci3g3302	K08851		-	jre:109018511	393.275