Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3300 ATGAAAGCTGAGGGGGGGCACGGCGCGGCCATACCACCGGCCAAGCCATTTTTGAAGTGGCTCAAGTGCTCTCTCAAGGAGACTTTCTTTCCGGATGACCCCTTGAGGCAGTTCCAGAACCAGCCACCTTCCAAGAGGCTGCTGCTCGCCCTTCAATACTTGTTCCCCATCTTACAATGGGCTCCTCGCTACACCCTCCACTTCCTCAAATCTGACCTCATCGCCGGCATCACCATCGCCAGCTTGGCTATTCCTCAGGGCATCAGTTACGCCAAGCTCGCCAACCTCCCTCCCATCCTCGGTTTATATTCGAGCTTCATACCGCCATTGATTTATGCGATGCTGGGAAGCTCCAGGGATTTGGCAGTAGGAACCGTGGCTGTCGGATCGCTTCTGATGGGTTCAATGCTGGGGACTGTCGTTAATCACAGCGACAACCCAAAGCTTTTTCTTCACCTCGCTTTCACTGCTACTTTCTTCGCCGGCATTTTTCAGGCTGCCCTGGGTCTCTTCAGGCTAGGGTTTATCGTGGATTTTCTGTCACATGCAACCATAATAGGGTTCATGGGAGGAGCGGCCACGGTGGTATGCCTGCAACAGCTAAAGTCCATTCTGGGGCTCCAAGATTTCACACACGAGGCCGATCTCGTCTCCGTCATGCGATCCGTGTTTACCCAAACACATGAGTGGAGTTGGGAAAGCGCCGTGTTAGGATGCTGTTTCATTTTCTTCCTCCTCATCTCCAGATTCTTTAGCAAAAAACAACCAAAATTGTTCTGGGTGTCAGCAATGGCGCCGTTGACGACCGTTATCTTAGGAAGCATTCTGGTTTACGTCACTCATGCGGAGAAACACGGCGTCCAAGTGATAGGAGATTTGAAGAAGGGGCTAAATCCAGGTTCCCTCACAGGGCTGGTATTCGTGGCGCCTTACATGAGCACTGCTATTAAGACTGGCCTTATCACTGGCATCATAGCCCTTGCGGAAGGAATAGCGGTAGGGAGAAGCTTCGCAATGTACAAGAATTACCATATTGATGGCAACAAAGAGATGATAGCTATTGGGACAATGAACATAGTTGGTTCGTTCGCCTCTTGCTACCTCACCACGGGTCCATTCTCGCGTTCAGCTGTGAATTATAATGCTGGGTGCAAGACTGCGGCATCAAATATAGTAATGGCAATAGTAGTCATGTTGACGTTGTTATTCCTGACACCCTTGTTCCATTACACTCCCCTGGTGGTTCTATCAGCCATAATAGTGTCGGCAATGCTTGGGCTTATAGACTACCAAGCAGCCATCCATCTCTATAAGATTGACAAATGTGATTTTCTTGTATGCATGAGTGCCTATATTGGCGTCGTCTTTTGCAGCGTTGAAATTGGCCTTGCCATAGCGGTTGCAATATCTGTACTTAGGGTGCTTCTGTTTATTGCAAGGCCAAGGACATCTGTTTTAGGCAACATTCCAAATTCTGTAGTATATAGAAATGTTGAACAATATCCAAATGCAACCCACGTTCCTGGAATCCTGATTCTTGAGATTGATGCACCCATTTACTTTGCCAATGCAAGCTACTTGAGAGAGAGGATCACAAGGTGGATTGATGAAGAGGAAGACAGGATTAAAGTCACAGAGGAGACGAGCTTGCGGTATGTTATAATGGATATGACTGCTGTTGGGAACATCGACACTAGTGGAATAAGCATGCTTGAAGAGATCAAGAAGGTTGTAGACAGAAGAGGACAACAAATCGTTCTGGTGAATCCCGCAGGAGAAGTGATGAAGAAACTGAACAAAGCCAAGTTCATAGAAGAGATAGGGCAGAAATGGATATGTCTAACAGTGGAAGAGGCCGTTGAAGCATGCAACTACATGCTTCACACATGCAAAACCAATCCCACGAAGAATGAATCAGAGGGTTGGAACGCTTTGTGA 1938 0.4778 MKAEGGHGAAIPPAKPFLKWLKCSLKETFFPDDPLRQFQNQPPSKRLLLALQYLFPILQWAPRYTLHFLKSDLIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMLGSSRDLAVGTVAVGSLLMGSMLGTVVNHSDNPKLFLHLAFTATFFAGIFQAALGLFRLGFIVDFLSHATIIGFMGGAATVVCLQQLKSILGLQDFTHEADLVSVMRSVFTQTHEWSWESAVLGCCFIFFLLISRFFSKKQPKLFWVSAMAPLTTVILGSILVYVTHAEKHGVQVIGDLKKGLNPGSLTGLVFVAPYMSTAIKTGLITGIIALAEGIAVGRSFAMYKNYHIDGNKEMIAIGTMNIVGSFASCYLTTGPFSRSAVNYNAGCKTAASNIVMAIVVMLTLLFLTPLFHYTPLVVLSAIIVSAMLGLIDYQAAIHLYKIDKCDFLVCMSAYIGVVFCSVEIGLAIAVAISVLRVLLFIARPRTSVLGNIPNSVVYRNVEQYPNATHVPGILILEIDAPIYFANASYLRERITRWIDEEEDRIKVTEETSLRYVIMDMTAVGNIDTSGISMLEEIKKVVDRRGQQIVLVNPAGEVMKKLNKAKFIEEIGQKWICLTVEEAVEACNYMLHTCKTNPTKNESEGWNAL 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3300 645 Gene3D STAS domain 480 626 IPR036513 -
Prci3g3300 645 ProSiteProfiles STAS domain profile. 500 623 IPR002645 -
Prci3g3300 645 PANTHER SULFATE TRANSPORTER 22 624 IPR001902 GO:0016020|GO:0055085
Prci3g3300 645 CDD STAS_SulP_like_sulfate_transporter 501 616 - -
Prci3g3300 645 ProSitePatterns SLC26A transporters signature. 98 119 IPR018045 GO:0008271|GO:0008272
Prci3g3300 645 Pfam STAS domain 501 619 IPR002645 -
Prci3g3300 645 FunFam Sulfate transporter 31 480 626 - -
Prci3g3300 645 Pfam Sulfate permease family 69 449 IPR011547 GO:0016020
Prci3g3300 645 NCBIfam sulfate permease 56 619 IPR001902 GO:0016020|GO:0055085
Prci3g3300 645 SUPERFAMILY SpoIIaa-like 502 624 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3300 Prci-Chr3 43850845 43856008 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3300 2 633 Inorganic Solute Cotransporters AT4G02700 66.035 0.0 868
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3300 K17471 - gmx:100804670 1078.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g3300 3 43850845 43856008 Prci3g3300 3 43850845 43856008 ECH