Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3286 ATGTCCAATTCTGCTTCTTTGTCTGAAGAAGCCACTGTTTCTTCTGGTACTAGAGTCCAGAACTTCACTGCATCGGATCATGTCGTTTCAACCATTCAGCCTCAGCAGCCCCAAAAGATAAAGAGAAAAAGAAGCCTCCCTGGAAATCCTGACCCAGATGCTGAGGTGATTGCGTTATCCCCAAAGACCCTTCTGGCTACCAATAGATACGTGTGTGAAATCTGCAACAAGGGTTTTCAGCGAGATCAGAATCTCCAGCTACACAGGAGAGGGCATAACCTTCCATGGAAGCTCAAACAACGGAACAGCAAAGAAGTGAAAAAGAAAGTCTATGTTTGCCCCGAGCCTTCGTGTGTTCATAACAATCCCTCGAGAGCTCTGGGTGATCTCACGGGTATCAAGAAACACTATTGCAGAAAACATGGGGAGAAGAAGTGGAAATGCCACAGATGCTCCAAAATCTACGCTGTTCAGTCAGATTGGAAAGCTCACTCCAAAACTTGTGGAACTAGAGAATACAGATGTGATTGCGGAACCCTTTTCTCCAGGAAGGACAGCTTCATAACTCATAGGGCGTTTTGTGACGTATTGGCCGAAGAAAGTGCAAGATTCACAGCCAATCAACTAACTTCCACAAACCCAGTGTTATTTCAATCTCTCTTCCCTTTCCAAAATCAGATCTTGGTGAATTCCTGGGATGCATCTGGAGAAAACCCTAACCCTAGTAACATTGATACCATCCATATCAAGACCGAAGCTCAGTGTTTTCAGGTCCCAACACCCTTTTCTTCACAATTTCTTCAAGTGCAGCAGGAGAATCAGAAGAACGTGATAAACCCATTCTCAGGAACTCTCCATGTGCCCTCAAACGCCGCCACCTCGGCCCACCTGTCAGCCACTGCGCTCCTCCAAAAGGCTGCAAATGTGGGTCCCACTTCTATCGCAGTTCCAGGCGCTGCCGCTGCAGCTGATGGCTGTGGGCCTCAGTCGACAATGGGTCACGTGACTCAGCCAAGCATGGGCGAGTATGGACTTGCAACTCAGCAGATCGACTCGGGGGGTCACGACTGCATTGGAGGGCTCATGACCTGGAATCAGAGCGAACGTCTGACCAGAGACTTCCTCGGCCTGACCGCCGATGTAAACGGCGGAAGCAATGGTGACTCCGTTGACGTTGGCCTGAGCGCGAGGGACATGCTGATCTTCACGGGGGGAGTAGAGTGTGAGTATCTTCCATACGATCACCATCAGCACTCCTCACTCTTCAAGTGCCAACAAGATTCTGGATTCTTTGGGACTGTCACTGCCCCAGAGACATGGGGAACTCTTGAGAACTCTTGA 1341 0.4929 MSNSASLSEEATVSSGTRVQNFTASDHVVSTIQPQQPQKIKRKRSLPGNPDPDAEVIALSPKTLLATNRYVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRNSKEVKKKVYVCPEPSCVHNNPSRALGDLTGIKKHYCRKHGEKKWKCHRCSKIYAVQSDWKAHSKTCGTREYRCDCGTLFSRKDSFITHRAFCDVLAEESARFTANQLTSTNPVLFQSLFPFQNQILVNSWDASGENPNPSNIDTIHIKTEAQCFQVPTPFSSQFLQVQQENQKNVINPFSGTLHVPSNAATSAHLSATALLQKAANVGPTSIAVPGAAAAADGCGPQSTMGHVTQPSMGEYGLATQQIDSGGHDCIGGLMTWNQSERLTRDFLGLTADVNGGSNGDSVDVGLSARDMLIFTGGVECEYLPYDHHQHSSLFKCQQDSGFFGTVTAPETWGTLENS 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3286 446 MobiDBLite consensus disorder prediction 1 42 - -
Prci3g3286 446 Pfam Zinc finger, C2H2 type 70 92 IPR013087 -
Prci3g3286 446 MobiDBLite consensus disorder prediction 1 54 - -
Prci3g3286 446 Gene3D Classic Zinc Finger 104 194 - -
Prci3g3286 446 FunFam protein indeterminate-domain 12-like 49 117 - -
Prci3g3286 446 Gene3D Classic Zinc Finger 69 93 - -
Prci3g3286 446 FunFam protein indeterminate-domain 5, chloroplastic-like 124 203 - -
Prci3g3286 446 SMART c2h2final6 111 141 IPR013087 -
Prci3g3286 446 SMART c2h2final6 146 166 IPR013087 -
Prci3g3286 446 SMART c2h2final6 70 92 IPR013087 -
Prci3g3286 446 ProSitePatterns Zinc finger C2H2 type domain signature. 72 92 IPR013087 -
Prci3g3286 446 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 28 385 IPR031140 -
Prci3g3286 446 ProSiteProfiles Zinc finger C2H2 type domain profile. 70 92 IPR013087 -
Prci3g3286 446 SUPERFAMILY beta-beta-alpha zinc fingers 69 166 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3286 Prci-Chr3 43771264 43775477 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3286 10 432 IDZ Gene Family AT4G02670 49.309 4.05e-123 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci3g3286 zf-C2H2 0.003 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3286 K25870 - qsa:O6P43_010584 523.857