Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3281 ATGACGACGGGCATCGGCCACGACCAGAACCTAGAAAAACAGTTTCACAAGCAAATGGGCTGCATGGCTGGCTTCCTTCAGATCTTCGATCGCCACCAGATACTCACCGGCAAGCGCATCTACTCCGCCAAGCGGCTTCCCCCCTCCGATGTGGCGAATTCGTCACCGGAACCGCTTCACTTTGTTAGCTCCCCAGCGAAATGCAGAGAAGTGGAGACCCAGCCGCCGAGATCAGCACCGTCGCCGGACCGTGGGAAACAGAGTCCCTCCAGGGAGCCCCGGTCTCCAGCGCCCGAATCTCAAACCAACGTGCCCCTTCCTCTTCCCGTTTTTGAATTCAAGGAAGGCACGAGGTCTTCTTGGAAGTTCGCCAGAGAAGCTCCCAGGCTATCCTTGGACAGCAGAGCAGTAGTGGACGCCAAGGGCACCCTACACCCGAGGGGGATCCGAACGAGTTCTACAATGTTATCGTCCGATCGATGTGAGAATCCAGCTGACGCTGCGGAGAGTGATAGCGAGAAACAGCGTCGATCGACTAGCGTGATAGCCAGGCTCATGGGGCTGGAATCTTTACCGGATTCGGATCCTGAACCGGTCAAGAATGCTGAACTCCGAAGATCCGCTTCTGAGTCCAGAGTTAGCAGAGATCTGTTCCAGCATCGTTACTTTGACAGTAACAATATTCAGCGAAAGCAGTTACAGCTGCAGTCAAACAGTCAGGTTAACATTTCCAGCAATGTAGCCAGGGACCATGCAGCAGCCATCGACAATCGTCGTGTATACAATATCAGACCGGCAGATCCAAAAGAATTTGCTGTACGAAATGGCAAGACAGAGCCTGCAAAAACTCCTCCTAGGGGAATAGGACAAAAGAAGGGTTTCTTTGATTCCGCTGACTTTTTCCCCGAGCCAAAGCACACTGTATCAATCTACGGGGAGATTGAGAAGAGGTTGAAGATGAGGGGAATTGATGAACCATCTAAGGATCTCGAGACTCTCAAGCATATCCTCGAGGCTCTGCAGCTCAAAGGTCTGTTACATTCCAAGAAATCCTCATCACAAGCCAACCAGAAGAACTTCGTGTTTGACGGCAGCATCTCAGCGAATGAATCCCCGATTGTTGTGATGAAGCCAGCAAGATCTCCGTCTTCATGGAATCGACCTGGAAGGGTCGGTTGTGACTCTCCGCCCTCGAGCTTTCGATCGAGTCCTCGAGCTCGAGGTAACATGAATCTTGGCAACGAGACTCTTCCCACAGTGAGTCCGACGCGTGAAAGGCCAGAGTTGAATTGGACTGCACGAAATCAGCCCAGAGTCAGAAACTTGAGCTTGCCCACTCGCAGCGAAAGCAGTGTGAAGAGCCCAAGCCGGAGTAGGCTTATGAACATGGAGGAACAGAGGAAAGGGAATGACTCTGTTAGTCAGAGAAGAATCTGTCCAGTTCATTCCCCAAAACTAGGTAGCAGAAGGAATGTACCCCATCGGCAAGTGACGACGAATCGATCGCCGAGAATGAGAAAACCGGCGGCTGAGATATACGTGAAGGAGAAGGAGTTGAGTGTAGCAGAGGATGAATCATCCACTATTTCGGAGAGCAGCATTAGCACGTCTTCGCAGACAGATACAGAGAGATGCAAGTTGGAGGAGCACAAGGAAGGGAGAATTCTATTGGAGAGGTGTGACAAGTTGCTGCACAGCATAGCCGAAATAACAGCGAGCGAGTTGCAGCCAAGTCCAGTCTCAGTGCTGGACTCGTCTTTTGACAAGGACGAGTGTTCATCACCATCTCCAGTCATGAAGCGGTGCATTGATTACAGAGAACAACCGGTGGAGTCGGAGGAGGACATGTGGAGTGCAGCAATAGGTTTCTTAGGAGGAGCCAAATCGGAGGAGACATCCGAGGATTACGACTTTGTTTACGTATCGGAAATCCTGCGAGCATCCAATTACTTCCCCGAAGACAGCGACATTTTCTTATTACTGGAGAAGCAGCAGTATCTCAAGGGGAAGGACACCTCCAAAGCATCTACGCTTCAAAGAAGACTGATCTTCGACACCATACACGAAATCCTGAAGCGGAGCAAACAACTACCACCGTGGAAGGCAATTTCGTGGATCCGACAGAGGCCATTGTTGGCGAGAATATGGTCGGAGTTCCGGCAGATCCGAAGGGAGAAGAGGAACGAGGACATGAACGGATGGGAAGATTGCCCCGTGGAGATGGGCGAGGCTGTTCTGGACATCGAACGTCTCGTGTTCAAGGATCTCATCGGCGAAACCATACGAGACCTCGCCCAATCGTCTAACAGGCTCTCGGCCCTCCGTAGGAAATTGGTCTTTTGA 2343 0.5152 MTTGIGHDQNLEKQFHKQMGCMAGFLQIFDRHQILTGKRIYSAKRLPPSDVANSSPEPLHFVSSPAKCREVETQPPRSAPSPDRGKQSPSREPRSPAPESQTNVPLPLPVFEFKEGTRSSWKFAREAPRLSLDSRAVVDAKGTLHPRGIRTSSTMLSSDRCENPADAAESDSEKQRRSTSVIARLMGLESLPDSDPEPVKNAELRRSASESRVSRDLFQHRYFDSNNIQRKQLQLQSNSQVNISSNVARDHAAAIDNRRVYNIRPADPKEFAVRNGKTEPAKTPPRGIGQKKGFFDSADFFPEPKHTVSIYGEIEKRLKMRGIDEPSKDLETLKHILEALQLKGLLHSKKSSSQANQKNFVFDGSISANESPIVVMKPARSPSSWNRPGRVGCDSPPSSFRSSPRARGNMNLGNETLPTVSPTRERPELNWTARNQPRVRNLSLPTRSESSVKSPSRSRLMNMEEQRKGNDSVSQRRICPVHSPKLGSRRNVPHRQVTTNRSPRMRKPAAEIYVKEKELSVAEDESSTISESSISTSSQTDTERCKLEEHKEGRILLERCDKLLHSIAEITASELQPSPVSVLDSSFDKDECSSPSPVMKRCIDYREQPVESEEDMWSAAIGFLGGAKSEETSEDYDFVYVSEILRASNYFPEDSDIFLLLEKQQYLKGKDTSKASTLQRRLIFDTIHEILKRSKQLPPWKAISWIRQRPLLARIWSEFRQIRREKRNXEDMNGWEDCPVEMGEAVLDIERLVFKDLIGETIRDLAQSSNRLSALRRKLVF 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3281 781 MobiDBLite consensus disorder prediction 144 179 - -
Prci3g3281 781 Pfam Domain of unknown function (DUF4378) 637 760 IPR025486 -
Prci3g3281 781 MobiDBLite consensus disorder prediction 396 459 - -
Prci3g3281 781 MobiDBLite consensus disorder prediction 46 109 - -
Prci3g3281 781 Coils Coil 765 781 - -
Prci3g3281 781 MobiDBLite consensus disorder prediction 275 295 - -
Prci3g3281 781 PANTHER LONGIFOLIA PROTEIN 1 96 IPR033334 GO:0051513
Prci3g3281 781 MobiDBLite consensus disorder prediction 379 473 - -
Prci3g3281 781 MobiDBLite consensus disorder prediction 188 207 - -
Prci3g3281 781 MobiDBLite consensus disorder prediction 164 178 - -
Prci3g3281 781 Pfam DUF761-associated sequence motif 172 194 IPR032795 -
Prci3g3281 781 MobiDBLite consensus disorder prediction 523 543 - -
Prci3g3281 781 MobiDBLite consensus disorder prediction 525 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3281 Prci-Chr3 43679562 43683499 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3281 523 781 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 47.143 3.59e-61 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3281 - - pcin:129306323 1489.94