Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3269 ATGGACACCCACTCGACTCACCCGGCCGGAACCATTCGCTCCCGTAGCTCCCAGTCCCCTTCTCCCTCTCATTCTGCCTCCGCCTCCGCTACTTCTACCATCCACAAGCGCAAGATGGCCTCTGATGATCACGCTCCTCCCTTCCCCCCCTCTTCCTTCTCCGCCGACACCCGAGACGGCGCTCTGACCTCCAATGATGACCTCGAGAGCATTTCCGCCCGCGGCGCTGATTCCGACTCCGACGATGAGTCCGAGGATGCCGTTGTTGACGACGACGAGGAGGATTACGACAATGACTCCTCCATGCGCACCTTCACCGCCGCAAGGCTTGAAAACCCCTCCTCAGCCCCTCGGAATACCAAGCTCCAAAAGGATAATACGACGGTCAAGATGGAGAATTCGGACGGTGCGAAAGACGCTGCCACTGCTGGGACTGCTACGGTGGGAACCATTCCCACCTCCACCTCGGTTCCGGGCATTATGGTTAAGGAGGACGCCACCAAGATTTTTACTGATAATTTGCAGACGAGTGGGGCATACTGTGCAAGGGAGGAGAGTCTCAGGAGAGAGGAAGAAGCAGGGAAGCTGAAATTCGTATGTCTTTCAAATGATGGCGTTGATGAGCATATGGTTTGGTTGATAGGATTGAAGAATATTTTTGCTAGACAACTTCCCAATATGCCCAAGGAATACATTGTCCGACTTGTTATGGATAGGAGCCATAAGTCTGTGATGGTCATAAGAAGTAACAAAGTTGTTGGAGGAATTACATATCGCCCATATGTAAACCAAAAGTTCGGTGAGATAGCCTTTTGTGCAATAACAGCTGATGAGCAAGTAAAAGGTTATGGCACCAGACTGATGAATCACTTGAAACAGTATGCTCGTGATGAGGATGGATTGACACACTTTCTCACATATGCTGATAATAATGCTGTTGGCTATTTTATCAAGCAGGGCTTCACCAAAGAGATTCACTTGGAGAAAGATCGATGGCAAGGGTATATAAAGGATTATGATGGAGGAATTCTCATGGAATGCAAGATTGATCCAAAGCTCCCATACACTGATTTATCAACTATGATTCGTCGTCAGAGGCAGGCTATTGATGAAAAGATAAGAGAGTTGTCAAACTGTCACATTGTTTATCCCGGATTTGATTTTCAGAAGAAAGAAGCTGGTATTCCTAAAAAATCGATCAAAGTTGAGGATATCCCTGGTTTGAGAGAGGCTGGATGGACTGCTGATCAGTGGGGTCATTCCCGATTTAGAAGTAGTTTATGTGTTTCTACAGACAGCGCTACAAATCAAAAACATTTGACTGCATTTATGCGATCACTTCTAAAGTCAATGCACGACCATGCTGATGCCTGGCCATTCAGAGAACCAGTTGATGCCCGGGATGTTCCTGATTATTATGACATCATCAAAGATCCAATGGATCTGAAGACAATGTCAAAGAGGGTGGAGTCTGAGCAATATTATGTTACGTTAGAGATGTTCGTTGCAGATGCCACCAGAATGTTCGCCAATGCACGAACCTATAACTCTCCAGAGACGATTTATTATAAATGCGCTGCCAGGCTGGAAGCCCATTTTCGGAGCAAAGTCCAATCTGGTGTACAGTCGGGCACCAAAATTCAGTAG 1647 0.4706 MDTHSTHPAGTIRSRSSQSPSPSHSASASATSTIHKRKMASDDHAPPFPPSSFSADTRDGALTSNDDLESISARGADSDSDDESEDAVVDDDEEDYDNDSSMRTFTAARLENPSSAPRNTKLQKDNTTVKMENSDGAKDAATAGTATVGTIPTSTSVPGIMVKEDATKIFTDNLQTSGAYCAREESLRREEEAGKLKFVCLSNDGVDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRSNKVVGGITYRPYVNQKFGEIAFCAITADEQVKGYGTRLMNHLKQYARDEDGLTHFLTYADNNAVGYFIKQGFTKEIHLEKDRWQGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQRQAIDEKIRELSNCHIVYPGFDFQKKEAGIPKKSIKVEDIPGLREAGWTADQWGHSRFRSSLCVSTDSATNQKHLTAFMRSLLKSMHDHADAWPFREPVDARDVPDYYDIIKDPMDLKTMSKRVESEQYYVTLEMFVADATRMFANARTYNSPETIYYKCAARLEAHFRSKVQSGVQSGTKIQ 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3269 548 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 204 355 IPR016181 -
Prci3g3269 548 ProSiteProfiles Bromodomain profile. 452 523 IPR001487 GO:0005515
Prci3g3269 548 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 196 350 IPR000182 GO:0016747
Prci3g3269 548 PRINTS Bromodomain signature 486 504 IPR001487 GO:0005515
Prci3g3269 548 PRINTS Bromodomain signature 469 485 IPR001487 GO:0005515
Prci3g3269 548 PRINTS Bromodomain signature 504 523 IPR001487 GO:0005515
Prci3g3269 548 PRINTS Bromodomain signature 455 468 IPR001487 GO:0005515
Prci3g3269 548 SUPERFAMILY Bromodomain 433 538 IPR036427 GO:0005515
Prci3g3269 548 Pfam Acetyltransferase (GNAT) family 242 321 IPR000182 GO:0016747
Prci3g3269 548 PANTHER GH11602P 27 544 IPR037800 GO:0004402
Prci3g3269 548 MobiDBLite consensus disorder prediction 56 71 - -
Prci3g3269 548 ProSitePatterns Bromodomain signature. 457 515 IPR018359 -
Prci3g3269 548 MobiDBLite consensus disorder prediction 1 100 - -
Prci3g3269 548 CDD NAT_SF 243 297 - -
Prci3g3269 548 MobiDBLite consensus disorder prediction 79 98 - -
Prci3g3269 548 Pfam Bromodomain 445 527 IPR001487 GO:0005515
Prci3g3269 548 SMART bromo_6 433 542 IPR001487 GO:0005515
Prci3g3269 548 CDD Bromo_gcn5_like 440 538 - -
Prci3g3269 548 Gene3D - 428 545 IPR036427 GO:0005515
Prci3g3269 548 Gene3D - 192 356 - -
Prci3g3269 548 MobiDBLite consensus disorder prediction 1 35 - -
Prci3g3269 548 FunFam Histone acetyltransferase KAT2A 193 357 - -
Prci3g3269 548 MobiDBLite consensus disorder prediction 108 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3269 Prci-Chr3 43581745 43587794 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Prci3g3269 Bromodomain 6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3269 K06062 - zju:107425866 858.211