Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3247 ATGGAGAGTTCAATATCAATGGGTGAGCTTAACCTGAAGGACACAGAGCTAAGGTTGGGATTACCAGGAAGCGACGCGCCAGAGAAACGTTGCAGTGTTGGAAGCAAAAGGAAAAATTCACCTGAGGAAACAAGTCGTGAGGAGGAACCAACAGGCAAGAGGAATGATGCAAAAAGTGATCATAACGAGTCAGACGACGAGCCACCAGCAAAGGCACAAGTAGTGGGATGGCCGCCAGTGAGAAGTTTCAGGAAGAACAGCGGTCAACAAAAGGAGGAAGAAGGTGCAAGTTACGTGAAGGTCAGCATGGCTGGTGCTCCTTACTTGAGGAAGATAGATGTGAAGGTTTATAAGAGCTACACACAATTCCTGAAGGCCTTGGAAAACATGTTCAAGTGCACTTTTGGTGAATATTCAGAAAGGGAGGGATACAATGGATCTGAATATGTTCCCACGTATGAAGACAAAGAGGGTGACTGGATGCTTGTTGGAGATGTTCCATGGCAGATGTTCATGAGCTCCTGCAAGAGGCTCAGAGTCATGAAAGCGTCTGAAGCTAAGGGTTTGGGTTGTCTTTGA 579 0.4663 MESSISMGELNLKDTELRLGLPGSDAPEKRCSVGSKRKNSPEETSREEEPTGKRNDAKSDHNESDDEPPAKAQVVGWPPVRSFRKNSGQQKEEEGASYVKVSMAGAPYLRKIDVKVYKSYTQFLKALENMFKCTFGEYSEREGYNGSEYVPTYEDKEGDWMLVGDVPWQMFMSSCKRLRVMKASEAKGLGCL 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3247 192 Gene3D - 90 192 - -
Prci3g3247 192 MobiDBLite consensus disorder prediction 30 68 - -
Prci3g3247 192 SUPERFAMILY CAD & PB1 domains 90 182 - -
Prci3g3247 192 ProSiteProfiles PB1 domain profile. 96 183 IPR000270 GO:0005515
Prci3g3247 192 FunFam Auxin-responsive protein 91 192 - -
Prci3g3247 192 MobiDBLite consensus disorder prediction 1 96 - -
Prci3g3247 192 Pfam AUX/IAA family 33 190 IPR033389 -
Prci3g3247 192 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 9 187 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3247 Prci-Chr3 43557157 43558318 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3247 89 189 B3 DNA Binding Superfamily AT2G46530 33.663 8.06e-12 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Prci3g3247 AUX_IAA 5e-54 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3247 K14484 - gmx:100780752 264.233