Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3235 ATGGAGGAGGTTGAAGAAGCAAACAGAGCAGCTGTTGAAAGGTGCCACAGAGTTCTGAGTTTGCTGTCTCAGCGCCAGGATCAGGTTCCTTATGCCAATTTAATGGTGGAAACTGGCGAGGCTGTATCCAGATTCAAGAAAGTTGTTTCCTTGCTCAACAAAGGTTTGGGTCATGCAAGAGTCAGGAAGCTCAAAAAACTTCAAATCCCTTTCCCTCAAAGTATTCTCTTGGACAATCCAAATTCCAAATCAAACCACTGTCCCAAAAATCTGCTGTCTCTGCAACCTTGCTCTTCTGACAATTCAATTCAGGAGTTGGGCTCGAACATTGGAAACTCTCTGTCTCTGGGAAACCCATCTTTGGAATTGGGTTCAAGTGGTAAAAATCCCCTACACCTTAACCCTCCAGTGTCATCGCAGCACTATAACTTGCTTCAGCAGCAGCAGGAGCAGCAAAGAATATTGCTACAACAGCAACAAAAGAAGCACCAAGCAGAAATGATGTTTCGAAAGAACAATAGTGGAATCAATCTGAATTTTGATAGCTCTAGCTGCACACTAACGATGTCATCTACTAGGTCTTTCATTTCTTCCTTGAGCATAGATGGAAGCGTTGCTAATATGGATGGGAGTGCCTTCCATTTAATAGGAGCTCCACACTCTTCAGATCAGAATTCACAACACCACAAGAGAAAGTGTTCTGGCAAAGATGAGGGCAGTGTGAAATGTTGGAGCAGTACTAGATGCCATTGCTCAAAGAAGAGAAAGCATAGAGTGAAGAGGTCAATCAAGGTGCCTGCCATTAGCAACAAGCTTGCTGATATACCCCCTGATGATTATTCATGGAGAAAATATGGGCAGAAGCCAATCAAAGGCTCTCCTCATCCTAGAGGATACTACAAGTGCAGCAGCATGAGAGGGTGCCCTGCTAGGAAGCATGTGGAGAGGTGCTTAGAAGACGCTTCAATGCTAATTGTTACATATGAAGGTGAGCACAACCACCCTAGAATATCAGCACAATCTGCAAATCCATGA 1035 0.4406 MEEVEEANRAAVERCHRVLSLLSQRQDQVPYANLMVETGEAVSRFKKVVSLLNKGLGHARVRKLKKLQIPFPQSILLDNPNSKSNHCPKNLLSLQPCSSDNSIQELGSNIGNSLSLGNPSLELGSSGKNPLHLNPPVSSQHYNLLQQQQEQQRILLQQQQKKHQAEMMFRKNNSGINLNFDSSSCTLTMSSTRSFISSLSIDGSVANMDGSAFHLIGAPHSSDQNSQHHKRKCSGKDEGSVKCWSSTRCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEDASMLIVTYEGEHNHPRISAQSANP 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3235 344 Gene3D WRKY domain 261 336 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci3g3235 344 SUPERFAMILY WRKY DNA-binding domain 274 336 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci3g3235 344 MobiDBLite consensus disorder prediction 224 238 - -
Prci3g3235 344 FunFam WRKY transcription factor 65 260 337 - -
Prci3g3235 344 Pfam WRKY DNA -binding domain 278 335 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g3235 344 SMART WRKY_cls 276 336 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g3235 344 Pfam Plant zinc cluster domain 230 274 IPR018872 -
Prci3g3235 344 Coils Coil 142 162 - -
Prci3g3235 344 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 341 IPR044810 GO:0003700
Prci3g3235 344 ProSiteProfiles WRKY domain profile. 271 337 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g3235 344 MobiDBLite consensus disorder prediction 219 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3235 Prci-Chr3 43462482 43465092 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3235 1 341 WRKY Transcription Factor Family AT2G30590 56.201 4.93e-125 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci3g3235 WRKY 4.7e-26 CL0274