Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3225 ATGTTACAGGGTATTTCAGAAAACATTGTTGTTGGTTCTCCCATTTGGGTTGGTGATCCAGAACAAGTTTGGATTGATGGAGAAGTACTGAAAATTAATGGGGAGGAAGCTGAGGTTCACACTAGTTTTGGGAATACGGTTGTTGCCTGTTTGGCAAAATTATATCCCAAGGATGCAGATGCTCCTGCTGATGGAGTTGATGACATGACCAAGCTTGCTTATTTGCATGAACCAGCAGTGCTTCATAATTTAGCAACTAGATACAAGATGAATGAGATATATACCTACACTGGAAATATTCTTATTGCTGTCAATCCCTTTCAAAGTCTTTTGCACTTATATGACACTGATGTGATGCAACGGTACAAGGGAGCAATGCATGGAGATTTAAGCCCTCATGTTTTTGCTATTGCTGAAGCTGCATACAGGGCAATGATCAATGAGGAGAAAAGCAATGCTATTCTTGTTAGTGGTGAGAGTGGAGCTGGTAAGACAGAAACCACCAAAATGCTCATGCGTTATCTGGCTTATTTGGGTGGAAATGCTGCAGCTGAAGGGAGTAGTGTTGAACAACAAGTTTTAGAATCAAACCCAGTTCTTGAAGCATTTGGCAATGCAAAAACCGTCAGAAATAACAATTCCAGTCGTTTTGGAAAATTTGTTGAAATTCAATTCAATAAGCATGGAAAAATATCTGGCACAGCCATTAGAACATATCTCCTAGAGAAATCTCGTGTTTGCCAAATCTCTGATCCTGAGCGTAACTATCACTGTTTTTACCTTCTCTGTGCTGCTCCCCCTGAGGAAAGGGAGAGATATAAGTTGGGAGATCCTAAATCATTTCACTACCTTAATCAATCCAGTTGCTATGAATTAGATGGTGTTAATGCTGCCCAGGAGTACTTGAGCACGAAGAGAGCTATGGATGTAGTGGGAATCAATAGTGAAGAACAGGATGCAATTTTCAGAGTTGTGGCTGCTATTCTTCATCTTGGAAACATTAAGTTTGAAAAATCAGAAGAAGATTCATCAGTTTTAGCAGATGAAGAATCGAAGTCCCATCTTGAAATGACAGCAAAACTTCTCAAGTGTGTTCCAAGTGCTTTGGAAGATGCACTTTGTAAGCGTATGATGATTACCCCAGAAGAAGTCATTAAGAGAAGTCTTGATCCTCTTGCTGCGACAGTTAGCAGGGATGGTTTAGCCAAGACATTGTATTCTCGGTTATTTGACTGGTTAGTCCAAAAAATTAATGTCTCCATTGGGCAGGACCCCAGCTCAAATTGTATAATTGGAGTTCTTGACATATATGGTTTTGAAAGCTTTCGAACTAATAGTTTTGAGCAGTTTTGTATTAATTACACAAATGAAAAGCTGCAGCAACACTTCAACCAGCATGTGTTTAAGATGGAGCAAGAGGAATATACAAAGGAAGGGATTGATTGGAGCTACCTTGAATTTGTAGATAATCAAGATGTATTGGATCTTATTGAAAAGAAACCAGGTGGAATTATTGCTCTGCTTGATGAGGCATGCATGTTTCCAAAGTCAACTCACGAAACATTTTCACAAAAGCTTTACCAGACTTTCAAAAATAACAATCGCTTCATCAAGCCAAAATTATCTCGATCAGATTTTACCATTGTTCATTATGCAGGGGAGGTTCAGTATCAGTCTGAACAGTTTTTAGACAAAAACAAAGACTACATTGTTCCTGAACATCAAGACATGCTGAGTTCTTCCAAATGTTTTTTTGTAGCAGGCCTTTTCCCCCCACTTTCTGAGGAGACAGCCAAATCTGCTAAATTTGCTTCTATTGGTGCTCGCTTTAAGCTACAATTACAACAACTAATGGATACGCTCAAATGCACAGAGCCCCACTATATTAGATGCGTGAAGCCAAATAATGAGTTAAAACCTGCTGTTTTTGATAATATGAATGTCATCCAACAGCTTCGCTCTGGTGGTGTTCTTGAAGCAGTAAGAATTAAATGTGCTGGATTTCCAACACACAGGACCTTTCGTGATTTTTTAACTCGAGTGGCTCTTCTTGCTCCAGAGATTGTCAAAGGAAACTCTGATGAGAAAGATTCATGTATAAAGATTTTGCAGAAGATTGGCCTTACAGGTTATCAGATAGGGGAATCACAGATATTCTTGAGAGCCGGTCAGATGGCTGAGTTAGATGCTCAAAGGGCATTCCTCCTTAACAACTCCGCTATTGTTATCCAGAAACGGATCAAAACTTATCTGGCTCAGACAAGATATGTCACACTGCAGAAGTCTTCTGTTTGTGTGCAATCTTTTTGTAGAGGAGAAATGGCTCGGAGATCATATTATCAAGTGAAGAGAAATGCAGCTGCTGCCAGAATTCAAAGGAATATTCGCGGAAAACTAGCAAGGAAAAAGTACAACCAAATATGTACTTCGGCCATTGTATTGCAGACAGGCTTCCGAGCTATGGCCGCTCATGTTGAATTGAGACGTAGACTGGAAACAAGTGCATCAAATAAACTTCAGGTTGAGGAGAAAGCCGTTGAAATGGAATGCCAGGTTCAGGAGAAAGGAGTTGAAATGGAAGGCCGGGTTATGGAGAAAGCAGTGGAAAATGAAAGCCCTTGTATGAAAGAATCCTTAAATGATTGTAAAGATGCTGAAAGCATTCATGCTATCAAAGATTCCTCAATTACTTTCCAAGACTCTCAGAAGATTGAGGCTCTTACTGCAGAAGTTATAAATTTAAAGGTTATGTTGCATGCAGAAAAACAAAGAGCTGATGATTGTGAAAGGAAATATGTAGAAGCCCAAGAATCTAGGGAAGAGTTAAGCAAAAAGCTAGCAGAAACAGAAAAAAGAGTACATCAACTTCAAGACTCATTGAACAGGATGATATCTTCCATGTCAAGCCAAGTTGCGGAACTGAAATTGATATTAAATACTTCATCGAGATTAAGTTCAACTTTTCGGCCTATTGCGAGAGTTGATGCTGCTTCCAGCAACTCTGATACTTCATCCACAGATTCTGATTTCACAGTTTCAGCACCAGCTTCAAATGCAACCAATCCGTCTAACACCCAGCCTAGTTCTATTCAACTAGTTGTTCAGGGTGTCACTGCAGCGGATGGTTCAGGATCTGAAGGCGAAAAGGAGGGGTCATTTGATGATTTCTTCTAG 3174 0.3976 MLQGISENIVVGSPIWVGDPEQVWIDGEVLKINGEEAEVHTSFGNTVVACLAKLYPKDADAPADGVDDMTKLAYLHEPAVLHNLATRYKMNEIYTYTGNILIAVNPFQSLLHLYDTDVMQRYKGAMHGDLSPHVFAIAEAAYRAMINEEKSNAILVSGESGAGKTETTKMLMRYLAYLGGNAAAEGSSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFNKHGKISGTAIRTYLLEKSRVCQISDPERNYHCFYLLCAAPPEERERYKLGDPKSFHYLNQSSCYELDGVNAAQEYLSTKRAMDVVGINSEEQDAIFRVVAAILHLGNIKFEKSEEDSSVLADEESKSHLEMTAKLLKCVPSALEDALCKRMMITPEEVIKRSLDPLAATVSRDGLAKTLYSRLFDWLVQKINVSIGQDPSSNCIIGVLDIYGFESFRTNSFEQFCINYTNEKLQQHFNQHVFKMEQEEYTKEGIDWSYLEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLYQTFKNNNRFIKPKLSRSDFTIVHYAGEVQYQSEQFLDKNKDYIVPEHQDMLSSSKCFFVAGLFPPLSEETAKSAKFASIGARFKLQLQQLMDTLKCTEPHYIRCVKPNNELKPAVFDNMNVIQQLRSGGVLEAVRIKCAGFPTHRTFRDFLTRVALLAPEIVKGNSDEKDSCIKILQKIGLTGYQIGESQIFLRAGQMAELDAQRAFLLNNSAIVIQKRIKTYLAQTRYVTLQKSSVCVQSFCRGEMARRSYYQVKRNAAAARIQRNIRGKLARKKYNQICTSAIVLQTGFRAMAAHVELRRRLETSASNKLQVEEKAVEMECQVQEKGVEMEGRVMEKAVENESPCMKESLNDCKDAESIHAIKDSSITFQDSQKIEALTAEVINLKVMLHAEKQRADDCERKYVEAQESREELSKKLAETEKRVHQLQDSLNRMISSMSSQVAELKLILNTSSRLSSTFRPIARVDAASSNSDTSSTDSDFTVSAPASNATNPSNTQPSSIQLVVQGVTAADGSGSEGEKEGSFDDFF 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3225 1057 Gene3D Myosin VI head, motor domain, U50 subdomain 314 602 - -
Prci3g3225 1057 MobiDBLite consensus disorder prediction 996 1038 - -
Prci3g3225 1057 Gene3D - 736 785 - -
Prci3g3225 1057 Gene3D - 786 836 - -
Prci3g3225 1057 FunFam Myosin heavy chain 254 309 - -
Prci3g3225 1057 SMART iq_5 758 780 IPR000048 GO:0005515
Prci3g3225 1057 SMART iq_5 783 805 IPR000048 GO:0005515
Prci3g3225 1057 SMART iq_5 735 757 IPR000048 GO:0005515
Prci3g3225 1057 Pfam Myosin head (motor domain) 66 721 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci3g3225 1057 Gene3D - 668 734 - -
Prci3g3225 1057 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 10 59 IPR004009 GO:0003774|GO:0005524|GO:0016459
Prci3g3225 1057 PANTHER MYOSIN 56 1000 - -
Prci3g3225 1057 Gene3D - 440 624 - -
Prci3g3225 1057 Pfam Myosin N-terminal SH3-like domain 13 48 IPR004009 GO:0003774|GO:0005524|GO:0016459
Prci3g3225 1057 PRINTS Myosin heavy chain signature 198 225 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci3g3225 1057 PRINTS Myosin heavy chain signature 430 458 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci3g3225 1057 PRINTS Myosin heavy chain signature 151 176 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci3g3225 1057 PRINTS Myosin heavy chain signature 94 113 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci3g3225 1057 PRINTS Myosin heavy chain signature 483 511 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci3g3225 1057 SMART MYSc_2a 58 734 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci3g3225 1057 Pfam IQ calmodulin-binding motif 761 779 IPR000048 GO:0005515
Prci3g3225 1057 Pfam IQ calmodulin-binding motif 786 804 IPR000048 GO:0005515
Prci3g3225 1057 Pfam IQ calmodulin-binding motif 738 756 IPR000048 GO:0005515
Prci3g3225 1057 Coils Coil 904 966 - -
Prci3g3225 1057 ProSiteProfiles Myosin motor domain profile. 64 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci3g3225 1057 CDD MYSc_Myo11 78 721 IPR036018 -
Prci3g3225 1057 FunFam Class V myosin 440 582 - -
Prci3g3225 1057 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 784 IPR027417 -
Prci3g3225 1057 Gene3D - 254 312 - -
Prci3g3225 1057 MobiDBLite consensus disorder prediction 996 1057 - -
Prci3g3225 1057 ProSiteProfiles IQ motif profile. 784 810 IPR000048 GO:0005515
Prci3g3225 1057 Gene3D Kinesin motor domain 67 663 IPR036961 -
Prci3g3225 1057 ProSiteProfiles IQ motif profile. 759 788 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3225 Prci-Chr3 43308264 43323383 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3225 4 963 Myosins gene family AT1G54560 61.197 0.0 1304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3225 K10357 - gmx:100803485 1598.95