Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3224 ATGGAAGGCAATTATGTGAGAAGAGATCGCAAGCATGGAGAGGAAAACTTGAGCTACGAGGAGCATTCGTGGGCAAGCTCATGGCCAGCGAGAAATTACTCATGTAGCTTCTGCAAGAGAGAGTTCAGATCAGCTCAAGCTTTGGGAGGTCATATGAACGTGCACAGGAGAGATAGGGCTAGATTGAGATCGGGCATAATACCTCCCTTATGGCTTAATTCCGAATCTCTTAAATCTAACCCTATAACCTCTAGGCCACCTTCTAACCATACTGCCTTATCTTCTCATGAGCTTTTCGATCACGTTTGCTCACATCGCTCTGAAATCCACCATGCCCCTTCTCCCGCTTTGTCGTCTTCTTCGCCCTCCTTTGCTTCTGCAAGTGATGATAAGAAGCCACCCATGCTCGGCACATCTTCCAAGCTCCCTCTTTTGAGCCCTCAAAGAAGAGAAATTATCGTGAGTGGTGAGATCACGAGGAGTAGTTTTGGGGTTGACGAGGAATTGAAGGACTGTGCAAAAGAGAAAGGGCTTAAGGGTTTCGAGAACATCAAGGAGGATGACGATGATAATATCACGTTGGAGCTGGGTTTAGGGTTGGTTCAACACCCAAAGGAGCAAATAGATTTGGAGCTTCGACTCGGCCATTTCTAG 654 0.4694 MEGNYVRRDRKHGEENLSYEEHSWASSWPARNYSCSFCKREFRSAQALGGHMNVHRRDRARLRSGIIPPLWLNSESLKSNPITSRPPSNHTALSSHELFDHVCSHRSEIHHAPSPALSSSSPSFASASDDKKPPMLGTSSKLPLLSPQRREIIVSGEITRSSFGVDEELKDCAKEKGLKGFENIKEDDDDNITLELGLGLVQHPKEQIDLELRLGHF 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3224 217 ProSiteProfiles Zinc finger C2H2 type domain profile. 33 60 IPR013087 -
Prci3g3224 217 ProSitePatterns Zinc finger C2H2 type domain signature. 35 55 IPR013087 -
Prci3g3224 217 MobiDBLite consensus disorder prediction 110 142 - -
Prci3g3224 217 MobiDBLite consensus disorder prediction 113 127 - -
Prci3g3224 217 PANTHER OS07G0101800 PROTEIN 14 216 - -
Prci3g3224 217 Pfam C2H2-type zinc finger 33 57 - -
Prci3g3224 217 Gene3D Classic Zinc Finger 16 65 - -
Prci3g3224 217 SUPERFAMILY beta-beta-alpha zinc fingers 30 59 IPR036236 -
Prci3g3224 217 SMART c2h2final6 33 55 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3224 Prci-Chr3 43304481 43305134 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3224 28 217 C2H2 Transcription Factor Family AT2G42410 36.735 1.13e-23 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci3g3224 zf-C2H2_6 1.3e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3224 - - pcin:129305638 421.009