Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3220 ATGACTGGCTCTGGTTCTCCTTGTGGAGCCTGCAAATTCTTGAGAAGGAAATGTGTGAGAGGTTGTGTTTTTGCACCTTACTTTTGCCATGAGCAAGGAGCTACGCATTTTGCAGCCATTCATAAGGTGTTTGGTGCGAGCAATGTTTCCAAGCTCCTTGCTCACCTCCCTGTAAGTGACCGTACCGAAGCCGCCGTCACAATCTCATATGAAGCTCAAGCTAGGCTTCAGGATCCTATCTATGGCTGTGTTTCGCATATCTTCGCCCTCCAACAGCAGGTGGTCAATTTACAAGCACAGCTAGCTTATCTTAGGGAACAAGCAGCTCAAAGCTTCCTCAATGCCTCTTCCATGGAAAACCCTAATGAAAAGTACTGTGGAAAACCTATTACCACTTTCCCTCACGATCTTCATGGTTGGTTCCAGACCCAAAATTCCGACACCTCGGGGCATCAGTTTCTCCCTAATATGTCTAATAATTCCTCTTTAACAACACAGCATTATGGGAGCAGCAGCAGCACTCCTTTCCTGAATCCCAACCCGATCGGGAACTATGAAAATTCAGGAACCCTGGAAGATAGCATCTCATTTTCTAGCTTTGATGAGGCTGCTTCGAATTCAATGTCTTATGATTCGCAAGCAAACAGAAAGCAGTGGGGCTTTCATGAAGTGGATGACCTTCAATCAGTGGCTTTTGGTTTCAGTCGATCGGCTTCATGA 720 0.4597 MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVSDRTEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLAYLREQAAQSFLNASSMENPNEKYCGKPITTFPHDLHGWFQTQNSDTSGHQFLPNMSNNSSLTTQHYGSSSSTPFLNPNPIGNYENSGTLEDSISFSSFDEAASNSMSYDSQANRKQWGFHEVDDLQSVAFGFSRSAS 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3220 239 Coils Coil 87 107 - -
Prci3g3220 239 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Prci3g3220 239 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 205 - -
Prci3g3220 239 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Prci3g3220 239 MobiDBLite consensus disorder prediction 148 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3220 Prci-Chr3 43258190 43260700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3220 7 151 AS2 family AT3G58190 67.516 8.95e-71 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci3g3220 LOB 1.4e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3220 K13945 - gmx:100776678 336.65