Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3214 ATGGCCATGAACATGCGTCAATTACTCAGAAGGCTCTGTTTAAATACTGATTGGAAGTACGCCATCTTTTGGAGACTCAGACATGAGGATCGGAAGATCCTAACATGGGAGGATGGTTACCATGAAAATCCTGATGATTATGATTCGTTAGATGATGAGTGCTGCCAGAAGACCATGGAACAGTTTCACGTTGGGCATTTTTCTCATGACCCTCTTGGAATGGCTGTGAGAAAGATGTCAGATCATGTATATTCGTTAGGAGATGGTATTGTTGGACAGGTAGCTCTCAGTGGGAAGCATCAGTGGATCTATGCAGATGATCATGCTATGAGTTCTGGTTTGTCCTGTGAGTTTGCTGATGGATGGCAATCCCAGTTTTCTGCTGGAATTAGGACAGTTGTTGTTGTAGCTATAATCCCGCATGGAGTTGTTCAACTCGGTTCCTTAAATAAAGTGATTGAAGATATGAGAATTTTAACTCATATCAGAGGTGTTTTTTTGGCTAATCAAGATTATTCCATAGGCCATGTTCCCAATCATATACAATGTAGTGTGAAGAATTCTTCTTCTCTGCCAGAGGCATCAACATTGAAATTGTCTTCAGAAATTGGACCTGCTTGCTTGCTTGATACAGAGGAAACCGCGAGGGGTGAAAAACTGGATATTTTAATGCCTGTTCCATGTTCTGTGAATAACTTTCCACTTCCTGCTGTTTATCAGAAAATGACTGTTAATGTGACCGAACATGTAGGGCCTGAGGTTTGCAGTGATGAAAGTTCAGTTCTGCTCAAGTTGGTATCAAATATGATGAATGTGGAGCATCAAAAATTTTTAGACATGAGACCTCTAAATGAGAAGTTTGAAGTGGGCAGCAGTGGGTCCAAAGATATTAGGGTGGAATCAGAAAAAAATGTTACATCATTGCTACACAATTCAGTTATGGACAATAACTTCAGTGATTCTGTAGATCCATCCAAAAAAATTGGAGCTGATTTGGCCTGCTTGCCCTCAGACTTTCATGATGTTGTTTGTGAAGGTAATAAGTTGTGTTATCTAAATACTAGCCAGAAAGAGGCATTGATTTTTCCCAGATCTTCTGATGCAAGCTCCCAAAAAGATACAGAAAAGTCACAGCTTCAGGCTGCACCTTCTTACAAGAGTACCTCAAATGCATTGTTGAAATTCCCTGCTGGCTGTGAGCTACATGAAGCCCTTGGACCGGCTTTTGTGAAAAGTAGATATTTTGATTCAGAGGGACAGGTTAATGAGGATCTTACAATGATGAGGATGCCAGACGAGATCAGCTGTAGCCAGTTGACTCGTGAATCTTGTCCAGAGCATCTTTTGGAAGCAATAGTAGCCAATGCTTGTCATGGTAATAATGACATTAAGAGTGAACTTTCATACTCTGCATCAGTGCAATCTGCAATGATATCTGAAAGAATTCCTGAAGCTTCAATGCACACTGCCCCTGCTATTAATTCAGAAGGCTATTCAGTAGAGTCTTCTCTTGTGAGAGGAGACATATTCCACTCTTTGACTTCATCATGTCCTAGTTCATGTAGTGAACGGTTTGAAAGGTCTTCTGAACCTGGTAAGAACAAGAAGAGGGCCAGGCCTGGAGAAAGTGGTAGGCCTAGGCCAAGGGACAGGCAACTGATCCAAGATCGCATTAAGGAGTTAAGAGAATTGGTGCCAAATGGAGCAAAGTGCAGTATTGATTCACTACTGGAGCGCACAATAAAGCACATGCTCTTTCTGCAGAGCATTACTAAGCATGCTGACAAGCTAACTAAATTTACTGGTTCAAACACAAAGTTGCATCACTTGGAATCAGCTGTTCCTGGATCCTCTAGTTATGAACAGGGTTCGAGTTGGGCAATGGAAGTAGGTGGTCATTTGAAAGTTCATTCAATATTAGTGGAGAATCTTAGTAAGAATGGACATATGCTTGTTGAGATGCTTTGTGAGGAGTGCAGCCATTTTCTGGAGATAGCAGAAGCCATAAGGAGCTTGGGCCTGACAATTTTGAAAGGTGCAACAGAAGCTCGTAGTGAGAAGACATGGATGTGTTTTGTGGTTGAGGGCCAAAACAACAGAAATGTACACAGGTTGGATATCTTGTGGCCGCTTGTTCAAATACTGCAATCCAAGAGTACAATGCATGCACAATAA 2175 0.4152 MAMNMRQLLRRLCLNTDWKYAIFWRLRHEDRKILTWEDGYHENPDDYDSLDDECCQKTMEQFHVGHFSHDPLGMAVRKMSDHVYSLGDGIVGQVALSGKHQWIYADDHAMSSGLSCEFADGWQSQFSAGIRTVVVVAIIPHGVVQLGSLNKVIEDMRILTHIRGVFLANQDYSIGHVPNHIQCSVKNSSSLPEASTLKLSSEIGPACLLDTEETARGEKLDILMPVPCSVNNFPLPAVYQKMTVNVTEHVGPEVCSDESSVLLKLVSNMMNVEHQKFLDMRPLNEKFEVGSSGSKDIRVESEKNVTSLLHNSVMDNNFSDSVDPSKKIGADLACLPSDFHDVVCEGNKLCYLNTSQKEALIFPRSSDASSQKDTEKSQLQAAPSYKSTSNALLKFPAGCELHEALGPAFVKSRYFDSEGQVNEDLTMMRMPDEISCSQLTRESCPEHLLEAIVANACHGNNDIKSELSYSASVQSAMISERIPEASMHTAPAINSEGYSVESSLVRGDIFHSLTSSCPSSCSERFERSSEPGKNKKRARPGESGRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERTIKHMLFLQSITKHADKLTKFTGSNTKLHHLESAVPGSSSYEQGSSWAMEVGGHLKVHSILVENLSKNGHMLVEMLCEECSHFLEIAEAIRSLGLTILKGATEARSEKTWMCFVVEGQNNRNVHRLDILWPLVQILQSKSTMHAQ 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3214 724 MobiDBLite consensus disorder prediction 515 553 - -
Prci3g3214 724 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
Prci3g3214 724 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 538 587 IPR011598 GO:0046983
Prci3g3214 724 MobiDBLite consensus disorder prediction 364 383 - -
Prci3g3214 724 MobiDBLite consensus disorder prediction 526 553 - -
Prci3g3214 724 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 722 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3214 Prci-Chr3 43223904 43231440 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3214 1 719 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 40.154 1.17e-155 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3214 - - ccaj:109796613 887.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2439 1 44648669 44655661 Prci3g3214 3 43223904 43231440 CCT
Prci3g3214 3 43223904 43231440 Prci3g3214 3 43223904 43231440 ECH