Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3211 ATGGCCATGAACATGCGTCAATTACTCAGAAGGCTCTGTTTAAATACTGATTGGAAGTACGCCATCTTTTGGAGACTCAGACATGAGGATCGGAAGATCCTAACATGGGAGGATGGTTACCATGAAAATCCTGATGATTATGATTCGTTAGATGATGAGTGCTGCCAGAAGACCATGGAACAGTTTCACGTTGGGCATTTTTCTCATGACCCTCTTGGAATGGCTGTGAGAAAGATGTCAGATCATGTATATTCGTTAGGAGATGGTATTGTTGGACAGGTAGCTCTCAGTGGGAAGCATCAGTGGATCTATGCAGATGATCATGCTATGAGTTCTGGTTTGTCCTGTGAGTTTGCTGATGGATGGCAATCCCAGTTTTCTGCTGGAATTAGGACAGTTGTTGTTGTAGCTATAATCCCGCATGGAGTTGTTCAACTCGGTTCCTTAAATAAACAGGTGATTGAAGATATGAGAATTTTAACTCATATCAGAGGTGTTTTTTTGGCTAATCAAGATTATTCCATAGGCCATGTTCCCAATCATATACAATGTAGTGTGAAGAATTCTTCTTCTCTGCCAGAGGCATCAACATTGAAATTGTCTTCAGAAATTGGACCTGCTTGCTTGCTTGATACAGAGGAAACCGCGAGGGGGCCTGAGGTTTGCAGTGATGAAAGTTCAGTTCTGCTCAAGTTGGTATCAAATATGATGAATGTGGAGCATCAAAAATTTTTAGACATGAGACCTCTAAATGAGAAGTTTGAAGTGGGCAGCAGTGGGTCCAAAGATATTAGGGTGGAATCAGAAAAAAATGTTACATCATTGCTACACAATTCAGTTATGGACAATAACTTCAGTGATTCTGTAGATCCATCCAAAAAAATTGGAGCTGATTTGGCCTGCTTGCCCTCAGACTTTCATGATGTTGTTTGTGAAGGTAATAAGTTGTGTTATCTAAATACTAGCCAGAAAGAGGCATTGATTTTTCCCAGATCTTCTGATGCAAGCTCCCAAAAAGATACAGAAAAGTCACAGCTTCAGGCTGCACCTTCTTACAAGAGTACCTCAAATGCATTGTTGAAATTCCCTGCTGGCTGTGAGCTACATGAAGCCCTTGGACCGGCTTTTGTGAAAAGTAGATATTTTGATTCAGAGGGACAGGTTAATGAGGATCTTACAATGATGAGGATGCCAGACGAGATCAGCTGTAGCCAGTTGACTCGTGAATCTTGTCCAGAGCATCTTTTGGAAGCAATAGTAGCCAATGCTTGTCATGGTAATAATGACATTAAGAGTGAACTTTCATACTCTGCATCAGTGCAATCTGCAATGATATCTGAAAGAATTCCTGAAGCTTCAATGCACACTGCCCCTGCTATTAATTCAGAAGGCTATTCAGTAGAGTCTTCTCTTGTGAGAGGAGACATATTCCACTCTTTGACTTCATCATGTCCTAGTTCATGTAGTGAACGGTTTGAAAGGTCTTCTGAACCTGGTAAGAACAAGAAGAGGGCCAGGCCTGGAGAAAGTGGTAGGCCTAGGCCAAGGGACAGGCAACTGATCCAAGATCGCATTAAGGAGTTAAGAGAATTGGTGCCAAATGGAGCAAAGTGCAGTATTGATTCACTACTGGAGCGCACAATAAAGCACATGCTCTTTCTGCAGAGCATTACTAAGCATGCTGACAAGCTAACTAAATTTACTGGTTCAAACACAAAGTTGCATCACTTGGAATCAGCTGTTCCTGGATCCTCTAGTTATGAACAGGGTTCGAGTTGGGCAATGGAAGTAGGTGGTCATTTGAAAGTTCATTCAATATTAGTGGAGAATCTTAGTAAGAATGGACATATGCTTGTTGAGATGCTTTGTGAGGAGTGCAGCCATTTTCTGGAGATAGCAGAAGCCATAAGGAGCTTGGGCCTGACAATTTTGAAAGGTGCAACAGAAGCTCGTAGTGAGAAGACATGGATGTGTTTTGTGGTTGAGTGGTTGATAAGAAGTGACGTATCACAGGGCCAAAACAACAGAAATGTACACAGGTTGGATATCTTGTGGCCGCTTGTTCAAATACTGCAATCCAAGAGTACAATGCATGCACAATAA 2103 0.418 MAMNMRQLLRRLCLNTDWKYAIFWRLRHEDRKILTWEDGYHENPDDYDSLDDECCQKTMEQFHVGHFSHDPLGMAVRKMSDHVYSLGDGIVGQVALSGKHQWIYADDHAMSSGLSCEFADGWQSQFSAGIRTVVVVAIIPHGVVQLGSLNKQVIEDMRILTHIRGVFLANQDYSIGHVPNHIQCSVKNSSSLPEASTLKLSSEIGPACLLDTEETARGPEVCSDESSVLLKLVSNMMNVEHQKFLDMRPLNEKFEVGSSGSKDIRVESEKNVTSLLHNSVMDNNFSDSVDPSKKIGADLACLPSDFHDVVCEGNKLCYLNTSQKEALIFPRSSDASSQKDTEKSQLQAAPSYKSTSNALLKFPAGCELHEALGPAFVKSRYFDSEGQVNEDLTMMRMPDEISCSQLTRESCPEHLLEAIVANACHGNNDIKSELSYSASVQSAMISERIPEASMHTAPAINSEGYSVESSLVRGDIFHSLTSSCPSSCSERFERSSEPGKNKKRARPGESGRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERTIKHMLFLQSITKHADKLTKFTGSNTKLHHLESAVPGSSSYEQGSSWAMEVGGHLKVHSILVENLSKNGHMLVEMLCEECSHFLEIAEAIRSLGLTILKGATEARSEKTWMCFVVEWLIRSDVSQGQNNRNVHRLDILWPLVQILQSKSTMHAQ 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3211 700 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 698 IPR043561 GO:0003700|GO:0006355
Prci3g3211 700 MobiDBLite consensus disorder prediction 493 520 - -
Prci3g3211 700 MobiDBLite consensus disorder prediction 331 350 - -
Prci3g3211 700 MobiDBLite consensus disorder prediction 482 520 - -
Prci3g3211 700 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 167 IPR025610 -
Prci3g3211 700 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 505 554 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3211 Prci-Chr3 43223898 43231440 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3211 1 695 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 39.793 2.20e-151 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3211 - - ccaj:109796613 847.04