Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3210 ATGGCCATGAACATGCGTCAATTACTCAGAAGGCTCTGTTTAAATACTGATTGGAAGTACGCCATCTTTTGGAGACTCAGACATGAGGATCGGAAGATCCTAACATGGGAGGATGGTTACCATGAAAATCCTGATGATTATGATTCGTTAGATGATGAGTGCTGCCAGAAGACCATGGAACAGTTTCACGTTGGGCATTTTTCTCATGACCCTCTTGGAATGGCTGTGAGAAAGATGTCAGATCATGTATATTCGTTAGGAGATGGTATTGTTGGACAGGTAGCTCTCAGTGGGAAGCATCAGTGGATCTATGCAGATGATCATGCTATGAGTTCTGGTTTGTCCTGTGAGTTTGCTGATGGATGGCAATCCCAGTTTTCTGCTGGAATTAGGACAGTTGTTGTTGTAGCTATAATCCCGCATGGAGTTGTTCAACTCGGTTCCTTAAATAAACAGGTGATTGAAGATATGAGAATTTTAACTCATATCAGAGGTGTTTTTTTGGCTAATCAAGATTATTCCATAGGCCATGTTCCCAATCATATACAATGTAGTGTGAAGAATTCTTCTTCTCTGCCAGAGGCATCAACATTGAAATTGTCTTCAGAAATTGGACCTGCTTGCTTGCTTGATACAGAGGAAACCGCGAGGGGTGAAAAACTGGATATTTTAATGCCTGTTCCATGTTCTGTGAATAACTTTCCACTTCCTGCTGTTTATCAGAAAATGACTGTTAATGTGACCGAACATGTAGGGCCTGAGGTTTGCAGTGATGAAAGTTCAGTTCTGCTCAAGTTGGTATCAAATATGATGAATGTGGAGCATCAAAAATTTTTAGACATGAGACCTCTAAATGAGAAGTTTGAAGTGGGCAGCAGTGGGTCCAAAGATATTAGGGTGGAATCAGAAAAAAATGTTACATCATTGCTACACAATTCAGTTATGGACAATAACTTCAGTGATTCTGTAGATCCATCCAAAAAAATTGGAGCTGATTTGGCCTGCTTGCCCTCAGACTTTCATGATGTTGTTTGTGAAGAAAAGTCACAGCTTCAGGCTGCACCTTCTTACAAGAGTACCTCAAATGCATTGTTGAAATTCCCTGCTGGCTGTGAGCTACATGAAGCCCTTGGACCGGCTTTTGTGAAAAGTAGATATTTTGATTCAGAGGGACAGGTTAATGAGGATCTTACAATGATGAGGATGCCAGACGAGATCAGCTGTAGCCAGTTGACTCGTGAATCTTGTCCAGAGCATCTTTTGGAAGCAATAGTAGCCAATGCTTGTCATGGTAATAATGACATTAAGAGTGAACTTTCATACTCTGCATCAGTGCAATCTGCAATGATATCTGAAAGAATTCCTGAAGCTTCAATGCACACTGCCCCTGCTATTAATTCAGAAGGCTATTCAGTAGAGTCTTCTCTTGTGAGAGGAGACATATTCCACTCTTTGACTTCATCATGTCCTAGTTCATGTAGTGAACGGTTTGAAAGGTCTTCTGAACCTGGTAAGAACAAGAAGAGGGCCAGGCCTGGAGAAAGTGGTAGGCCTAGGCCAAGGGACAGGCAACTGATCCAAGATCGCATTAAGGAGTTAAGAGAATTGGTGCCAAATGGAGCAAAGTGCAGTATTGATTCACTACTGGAGCGCACAATAAAGCACATGCTCTTTCTGCAGAGCATTACTAAGCATGCTGACAAGCTAACTAAATTTACTGGTTCAAACACAAAGTTGCATCACTTGGAATCAGCTGTTCCTGGATCCTCTAGTTATGAACAGGGTTCGAGTTGGGCAATGGAAGTAGGTGGTCATTTGAAAGTTCATTCAATATTAGTGGAGAATCTTAGTAAGAATGGACATATGCTTGTTGAGATGCTTTGTGAGGAGTGCAGCCATTTTCTGGAGATAGCAGAAGCCATAAGGAGCTTGGGCCTGACAATTTTGAAAGGTGCAACAGAAGCTCGTAGTGAGAAGACATGGATGTGTTTTGTGGTTGAGTGGTTGATAAGAAGTGACGTATCACAGGGCCAAAACAACAGAAATGTACACAGGTTGGATATCTTGTGGCCGCTTGTTCAAATACTGCAATCCAAGAGTACAATGCATGCACAATAA 2118 0.4174 MAMNMRQLLRRLCLNTDWKYAIFWRLRHEDRKILTWEDGYHENPDDYDSLDDECCQKTMEQFHVGHFSHDPLGMAVRKMSDHVYSLGDGIVGQVALSGKHQWIYADDHAMSSGLSCEFADGWQSQFSAGIRTVVVVAIIPHGVVQLGSLNKQVIEDMRILTHIRGVFLANQDYSIGHVPNHIQCSVKNSSSLPEASTLKLSSEIGPACLLDTEETARGEKLDILMPVPCSVNNFPLPAVYQKMTVNVTEHVGPEVCSDESSVLLKLVSNMMNVEHQKFLDMRPLNEKFEVGSSGSKDIRVESEKNVTSLLHNSVMDNNFSDSVDPSKKIGADLACLPSDFHDVVCEEKSQLQAAPSYKSTSNALLKFPAGCELHEALGPAFVKSRYFDSEGQVNEDLTMMRMPDEISCSQLTRESCPEHLLEAIVANACHGNNDIKSELSYSASVQSAMISERIPEASMHTAPAINSEGYSVESSLVRGDIFHSLTSSCPSSCSERFERSSEPGKNKKRARPGESGRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERTIKHMLFLQSITKHADKLTKFTGSNTKLHHLESAVPGSSSYEQGSSWAMEVGGHLKVHSILVENLSKNGHMLVEMLCEECSHFLEIAEAIRSLGLTILKGATEARSEKTWMCFVVEWLIRSDVSQGQNNRNVHRLDILWPLVQILQSKSTMHAQ 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3210 705 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 510 559 IPR011598 GO:0046983
Prci3g3210 705 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 703 IPR043561 GO:0003700|GO:0006355
Prci3g3210 705 MobiDBLite consensus disorder prediction 498 525 - -
Prci3g3210 705 MobiDBLite consensus disorder prediction 487 525 - -
Prci3g3210 705 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 167 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3210 Prci-Chr3 43223897 43231440 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3210 1 700 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 40.103 6.88e-153 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3210 - - ccaj:109796613 855.514