Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3209 ATGGCCATGAACATGCGTCAATTACTCAGAAGGCTCTGTTTAAATACTGATTGGAAGTACGCCATCTTTTGGAGACTCAGACATGAGGATCGGAAGATCCTAACATGGGAGGATGGTTACCATGAAAATCCTGATGATTATGATTCGTTAGATGATGAGTGCTGCCAGAAGACCATGGAACAGTTTCACGTTGGGCATTTTTCTCATGACCCTCTTGGAATGGCTGTGAGAAAGATGTCAGATCATGTATATTCGTTAGGAGATGGTATTGTTGGACAGGTAGCTCTCAGTGGGAAGCATCAGTGGATCTATGCAGATGATCATGCTATGAGTTCTGGTTTGTCCTGTGAGTTTGCTGATGGATGGCAATCCCAGTTTTCTGCTGGAATTAGGACAGTTGTTGTTGTAGCTATAATCCCGCATGGAGTTGTTCAACTCGGTTCCTTAAATAAACAGGTGATTGAAGATATGAGAATTTTAACTCATATCAGAGGTGTTTTTTTGGCTAATCAAGATTATTCCATAGGCCATGTTCCCAATCATATACAATGTAGTGTGAAGAATTCTTCTTCTCTGCCAGAGGCATCAACATTGAAATTGTCTTCAGAAATTGGACCTGCTTGCTTGCTTGATACAGAGGAAACCGCGAGGGGTGAAAAACTGGATATTTTAATGCCTGTTCCATGTTCTGTGAATAACTTTCCACTTCCTGCTGTTTATCAGAAAATGACTGTTAATGTGACCGAACATGTAGGGCCTGAGGTTTGCAGTGATGAAAGTTCAGTTCTGCTCAAGTTGGTATCAAATATGATGAATGTGGAGCATCAAAAATTTTTAGACATGAGACCTCTAAATGAGAAGTTTGAAGTGGGCAGCAGTGGGTCCAAAGATATTAGGGTGGAATCAGAAAAAAATGTTACATCATTGCTACACAATTCAGTTATGGACAATAACTTCAGTGATTCTGTAGATCCATCCAAAAAAATTGGAGCTGATTTGGCCTGCTTGCCCTCAGACTTTCATGATGTTGTTTGTGAAGGTAATAAGTTGTGTTATCTAAATACTAGCCAGAAAGAGGCATTGATTTTTCCCAGATCTTCTGATGCAAGCTCCCAAAAAGATACAGAAAAGTCACAGCTTCAGGCTGCACCTTCTTACAAGAGTACCTCAAATGCATTGTTGAAATTCCCTGCTGGCTGTGAGCTACATGAAGCCCTTGGACCGGCTTTTGTGAAAAGTAGATATTTTGATTCAGAGGGACAGGTTAATGAGGATCTTACAATGATGAGGATGCCAGACGAGATCAGCTGTAGCCAGTTGACTCGTGAATCTTGTCCAGAGCATCTTTTGGAAGCAATAGTAGCCAATGCTTGTCATGGTAATAATGACATTAAGAGTGAACTTTCATACTCTGCATCAGTGCAATCTGCAATGATATCTGAAAGAATTCCTGAAGCTTCAATGCACACTGCCCCTGCTATTAATTCAGAAGGCTATTCAGTAGAGTCTTCTCTTGTGAGAGGAGACATATTCCACTCTTTGACTTCATCATGTCCTAGTTCATGTAGTGAACGGTTTGAAAGGTCTTCTGAACCTGGTAAGAACAAGAAGAGGGCCAGGCCTGGAGAAAGTGGTAGGCCTAGGCCAAGGGACAGGCAACTGATCCAAGATCGCATTAAGGAGTTAAGAGAATTGGTGCCAAATGGAGCAAAGTGCAGTATTGATTCACTACTGGAGCGCACAATAAAGCACATGCTCTTTCTGCAGAGCATTACTAAGCATGCTGACAAGCTAACTAAATTTACTGGTTCAAACACAAAGTTGCATCACTTGGAATCAGCTGTTCCTGGATCCTCTAGTTATGAACAGGGTTCGAGTTGGGCAATGGAAGTAGGTGGTCATTTGAAAGTTCATTCAATATTAGTGGAGAATCTTAGTAAGAATGGACATATGCTTGTTGAGATGCTTTGTGAGGAGTGCAGCCATTTTCTGGAGATAGCAGAAGCCATAAGGAGCTTGGGCCTGACAATTTTGAAAGGTGCAACAGAAGCTCGTAGTGAGAAGACATGGATGTGTTTTGTGGTTGAGTGGTTGATAAGAAGTGACGTATCACAGGGCCAAAACAACAGAAATGTACACAGGTTGGATATCTTGTGGCCGCTTGTTCAAATACTGCAATCCAAGAGTACAATGCATGCACAATAA 2205 0.4154 MAMNMRQLLRRLCLNTDWKYAIFWRLRHEDRKILTWEDGYHENPDDYDSLDDECCQKTMEQFHVGHFSHDPLGMAVRKMSDHVYSLGDGIVGQVALSGKHQWIYADDHAMSSGLSCEFADGWQSQFSAGIRTVVVVAIIPHGVVQLGSLNKQVIEDMRILTHIRGVFLANQDYSIGHVPNHIQCSVKNSSSLPEASTLKLSSEIGPACLLDTEETARGEKLDILMPVPCSVNNFPLPAVYQKMTVNVTEHVGPEVCSDESSVLLKLVSNMMNVEHQKFLDMRPLNEKFEVGSSGSKDIRVESEKNVTSLLHNSVMDNNFSDSVDPSKKIGADLACLPSDFHDVVCEGNKLCYLNTSQKEALIFPRSSDASSQKDTEKSQLQAAPSYKSTSNALLKFPAGCELHEALGPAFVKSRYFDSEGQVNEDLTMMRMPDEISCSQLTRESCPEHLLEAIVANACHGNNDIKSELSYSASVQSAMISERIPEASMHTAPAINSEGYSVESSLVRGDIFHSLTSSCPSSCSERFERSSEPGKNKKRARPGESGRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERTIKHMLFLQSITKHADKLTKFTGSNTKLHHLESAVPGSSSYEQGSSWAMEVGGHLKVHSILVENLSKNGHMLVEMLCEECSHFLEIAEAIRSLGLTILKGATEARSEKTWMCFVVEWLIRSDVSQGQNNRNVHRLDILWPLVQILQSKSTMHAQ 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3209 734 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 732 IPR043561 GO:0003700|GO:0006355
Prci3g3209 734 MobiDBLite consensus disorder prediction 365 384 - -
Prci3g3209 734 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 167 IPR025610 -
Prci3g3209 734 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 539 588 IPR011598 GO:0046983
Prci3g3209 734 MobiDBLite consensus disorder prediction 516 553 - -
Prci3g3209 734 MobiDBLite consensus disorder prediction 527 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3209 Prci-Chr3 43223897 43231440 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3209 1 729 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 40.256 1.55e-154 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3209 - - ccaj:109796613 885.945