Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3203 ATGGAAGAGGGGACCGGGAGCGAGAATAAGAACGGAAGGGAGAATAGTGGAGAGCTAAGATACCGGGGGATACGGCGGAGACCGTGGGGTAAGTTCGCCGCAGAGATTCGTGACCCGACCCGGAAGGGGACTCGCATTTGGCTGGGGACCTTCGACACCGCCGAGGAGGCTGCCAGGGCCTACGATGCCGCCGCTTTTCATTTCAGGGGTCACCGAGCCATTCTCAATTTCCCCAACGAGCATCAATCTCTTCATCCTCCTACTTCATCACTGCCTCTGCCCCTGTCCTCTTCTTCTCGTGATTCTTCCAGACTCCCGCCACCCGACGCCGACGGTGCTGTGGAGTTCGAATACCTGGACAACAACTTGCTGGATGAACTCCTTCAACAACAAGTTTACCCGCCACCCTGA 411 0.5718 MEEGTGSENKNGRENSGELRYRGIRRRPWGKFAAEIRDPTRKGTRIWLGTFDTAEEAARAYDAAAFHFRGHRAILNFPNEHQSLHPPTSSLPLPLSSSSRDSSRLPPPDADGAVEFEYLDNNLLDELLQQQVYPPP 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3203 136 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Prci3g3203 136 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Prci3g3203 136 MobiDBLite consensus disorder prediction 1 20 - -
Prci3g3203 136 Gene3D AP2/ERF domain 19 79 IPR036955 GO:0003700|GO:0006355
Prci3g3203 136 FunFam Ethylene-responsive transcription factor 2 20 79 - -
Prci3g3203 136 PANTHER DNA-BINDING DOMAIN 13 102 IPR044808 GO:0003700|GO:0009873
Prci3g3203 136 CDD AP2 20 79 IPR001471 GO:0003700|GO:0006355
Prci3g3203 136 SMART rav1_2 20 84 IPR001471 GO:0003700|GO:0006355
Prci3g3203 136 MobiDBLite consensus disorder prediction 81 104 - -
Prci3g3203 136 Pfam AP2 domain 20 71 IPR001471 GO:0003700|GO:0006355
Prci3g3203 136 ProSiteProfiles AP2/ERF domain profile. 20 78 IPR001471 GO:0003700|GO:0006355
Prci3g3203 136 MobiDBLite consensus disorder prediction 79 112 - -
Prci3g3203 136 SUPERFAMILY DNA-binding domain 20 79 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3203 Prci-Chr3 43184268 43185042 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3203 15 131 AP2-EREBP Transcription Factor Family AT3G23230 55.285 4.55e-38 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci3g3203 AP2 1.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3203 - - aip:107628225 130.183