Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3195 ATGGGGAGAGCTCCGTGCTGTGAGAAAATGGGACTGAAGAAGGGGCCATGGTCTCCGGAAGAAGATCACATACTCATCACTTACATCCAATCCCACGGTCACGGCAATTGGCGAGCCCTTCCCAAGCAAGCTGGGCTGTTAAGGTGTGGCAAGAGTTGCAGATTGCGATGGGCCAACTATTTGAGGCCTGACATCAAGCGCGGCAACTTCACCCCTGAAGAAGAGCACACCATCATCCACTTGCACCATCTCTTGGGAAACAGGTGGTCGACAATTGCAGCGAGGTTACCGGGACGCACGGACAATGAGATAAAAAATGTGTGGCACACCCGCCTGAAGAAGAGGCTCCCACAAAACCAAGAAAACCTCCCTACGAATCGGAACCCTAAACAGAAAAAACAAAACCCCGTGAGTTCTTCCGCCAATGATGATGACGATGACGATCACGCAGTGACCATCAAAACCCAGATCAAACAGCACTGTGCCCCGCTGTCTCCCCGGCAATGTTCTATCAGTATCAGTGACGCCTCCACCCTCACTACCAGTGACAATGTCGAACGTAACAATAATGACGTGTCCACAAATGATATTGAAACGCCAACTTTGGAGACTTTGGACGAGGACTTCTGGTCGGAAGTCCTATCGGCTGATAATTCCGGTGAAAACAGCGAACTTGCGGGAGTGGGTGATTATGCTGCTGACCCGCATTTCCAATTCCCATTCTCTCCGCTCACGGGTGAACCAAGTATTTGCGACGGGTTCAGCGTCGACTTTTGGGGCCACGATAACGTTTACACCAGAGCCCACGAGTTAACAGAGTTGTTACCGCAATTATGA 837 0.509 MGRAPCCEKMGLKKGPWSPEEDHILITYIQSHGHGNWRALPKQAGLLRCGKSCRLRWANYLRPDIKRGNFTPEEEHTIIHLHHLLGNRWSTIAARLPGRTDNEIKNVWHTRLKKRLPQNQENLPTNRNPKQKKQNPVSSSANDDDDDDHAVTIKTQIKQHCAPLSPRQCSISISDASTLTTSDNVERNNNDVSTNDIETPTLETLDEDFWSEVLSADNSGENSELAGVGDYAADPHFQFPFSPLTGEPSICDGFSVDFWGHDNVYTRAHELTELLPQL 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3195 278 MobiDBLite consensus disorder prediction 111 148 - -
Prci3g3195 278 CDD SANT 69 112 IPR001005 -
Prci3g3195 278 Gene3D - 11 67 - -
Prci3g3195 278 FunFam MYB-related transcription factor 13 66 - -
Prci3g3195 278 CDD SANT 16 61 IPR001005 -
Prci3g3195 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Prci3g3195 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Prci3g3195 278 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Prci3g3195 278 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Prci3g3195 278 MobiDBLite consensus disorder prediction 117 138 - -
Prci3g3195 278 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 223 - -
Prci3g3195 278 Gene3D - 68 142 - -
Prci3g3195 278 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Prci3g3195 278 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Prci3g3195 278 SMART sant 66 114 IPR001005 -
Prci3g3195 278 SMART sant 13 63 IPR001005 -
Prci3g3195 278 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3195 Prci-Chr3 43137987 43140016 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3195 1 224 MYB Transcription Factor Family AT2G31180 55.111 3.69e-79 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci3g3195 Myb_DNA-binding 2.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3195 K09422 - gmx:100775603 290.812