Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3180 ATGCGTCTCATCATCCTAGCTTTCTTCTTCCGCTTCCGGATTTTGAATCCTGTGCACGATGCATACCCCTTATGGCTTATTTCTGTAATCTGCGAGGTCTGGTTTGCTCTGTCTTGGATTCTTGACCAATTTCCCAAATGGTTTCCCATCACGCGCGAAACATACCTAGACCGCTTATCCATCAAGTTTGAGCATAAAGAGCCAAACCGTCTAGCCCCAATTGATGTGTTTGTAACTACTGTAGACCCTTCAAAGGAAGCACCCATTGTAACGGCAAACACCGTTCTCTCAATCTTGTCTGTTGATTACCCTGTTGAGAAGGTCACCTGCTTTGTCTCCGATGACGCTGCGTCTCTTTTGCTTTTTAATACCCTATCTGAAACAGTTGAATTCGCAAGAACATGGGTTCCCTTCTGCAAGAAGTATGGCATTGAGCCACGGGCACCTGAGTTCTATTTCTCTCAGAAAGTTAATTACTTTAAAGATAAGGTGCACCCCACATTTGTGAAGGAACGCAGGGCCATTAAGAGGGAGTATGAAGAATTCAAAGTGAAAATTAATGCATTGGTGGCAAAAGCTCAGAAAAAACCAGAGGAGGGGTGGGTGATGCAGAATGGTGTGCCATGGCCGGGGAACAATACTCACGATCATCCGGGAATTTGTCAGGTAGTTGAAGGTAAGGAATTGCCACGGCTAGTGTATGTTTCACGTGAAAATCGTCCTGGCTATCAACATCACAAAAAAGCTGGTGCCTTGAATGCTTTGGTTCGAGCTTCTGCTGTGCTTACAAATGCGCCTTTCTTATTGAATTTGGACTGTGACCAATACATCAACAATAGCAAGGTTATAAGGGAGGCTATGTGCTTTCTAATGGACCCCCGAGGAAGGGACCTCTGTTTTGTCCAATTTCCATTGAGTTTCGATGGCTTGGATGACCGTGATAGATATGCTAATCACAACACTGTTTTCTTTAATATCAACATGAAAAGCCTTGATGGGATTCAAGGTCCGGAATATGTTGGTGCTGGATGTGTATTTAATAGGTGGGCTTTATATGGCTATGATCCACAAATATCTAAGAGAAGCTCAAAGATGAATTGCGACTGGTGGCCTTTGTGGTGTCGTTGTTGCGGTGGTGGGCCTGATTCCATGTTTGATCTTGAAGAGATTGATGAAAATCTTGAAGGCTATGATGAACTAGAAATATTTGATCTTGAGGATATGGAAGAATCGCTTGAAAGTTCTGACTTGGAAGAAATAATAGAAATACTTGATCTTGACGAGAGTGAAGAAGAGCTTGAAGGTTATGATGAGGCAGGGGAACCATCCCTCATATCCAGAAATTTTATGAAGCGATTTGGGCAGTCACCAATTTTTATTGCTTCCACTTTGAGTAGGGCTGGTGGAGTTCTAAAAAGTGCGAATGCTATGAAGGAGGCCATTCATGTTATATGTTGTGACTATGAAGAGAAAACAGAATGGGGCAAAGAGATTGGTTGGATTTATGGCTCAGTCACAGAAGGTATCTTGACTGGTTTTAAGATGCATTGTAGAGGATGGAAATCAGCGTACTGCATACCAAAAAGAGCAGCTTTCAAGGGATTTGATCCAGTAAATCTATCAGATCAGTTATGCCAAGTTTTGAGATGGGCTTTTGGTTCTGTTGAGATATTCTTTAGTTTCCATTGCCCTATGTGGTATGGCTACAAAGGAAAGTTGAAGTGGCTTCAGAGGCTAGCTTATACTAATACTATTGTTCACCCAATCACCTCCATCCCTTTGATAATATACTGTACAATTCCAGCTGTCTGTCTTCTGACAGGGAAGTTCTTCATCCCAGCCCTGACAAATCTTGATAGCATTTGTTTGATGGCGCTTTTTATGTCCATCATCTTAACTTGTGTGCTAGAGCTTCGATGGAGTGGAGTTAGCATTCAGGATTGGTGGCACAATGAGCAACTCTGGATCATTGGAGGTGTTTCTTCACATTTGTTTGCTGTATTTCAAGGTCTGCTTAAAGTTGTTACTGGAGTAGATGCTGATTGTTTTGCCCGGGCAAAAGCAAAAGGTGATACTCACTTCTACCTCTTCAAGTGGACTAATCTTCTCATCCCACCAACCACTCTTATAATCTTGAACGTAGTGGGAATTGTGGCCGGAATCTCAGATGCCGTCAACAATGGCTATGGCTCATGGGGACCCTTATTTGGTAAACTATTTTTAGCTTTCTGGGTTATTGTGCACCTACATCCTTTCCTCAAAGGTCTGATGGGCAAGAATAGGACTCCTACCATCGTTGTCCTCTGGTCACTACTTGTAGCATTAGTTTTGTCAATGCTTTGGGTTCGGATTGATCCATTTTTGCCCAAGAAAACGGGTCCAGTACTCGAACAATGTGGGGTAGAATGTTAA 2412 0.4266 MRLIILAFFFRFRILNPVHDAYPLWLISVICEVWFALSWILDQFPKWFPITRETYLDRLSIKFEHKEPNRLAPIDVFVTTVDPSKEAPIVTANTVLSILSVDYPVEKVTCFVSDDAASLLLFNTLSETVEFARTWVPFCKKYGIEPRAPEFYFSQKVNYFKDKVHPTFVKERRAIKREYEEFKVKINALVAKAQKKPEEGWVMQNGVPWPGNNTHDHPGICQVVEGKELPRLVYVSRENRPGYQHHKKAGALNALVRASAVLTNAPFLLNLDCDQYINNSKVIREAMCFLMDPRGRDLCFVQFPLSFDGLDDRDRYANHNTVFFNINMKSLDGIQGPEYVGAGCVFNRWALYGYDPQISKRSSKMNCDWWPLWCRCCGGGPDSMFDLEEIDENLEGYDELEIFDLEDMEESLESSDLEEIIEILDLDESEEELEGYDEAGEPSLISXRNFMKRFGQSPIFIASTLSRAGGVLKSANAMKEAIHVICCDYEEKTEWGKEIGWIYGSVTEGILTGFKMHCRGWKSAYCIPKRAAFKGFDPVNLSDQLCQVLRWAFGSVEIFFSFHCPMWYGYKGKLKWLQRLAYTNTIVHPITSIPLIIYCTIPAVCLLTGKFFIPALTNLDSICLMALFMSIILTCVLELRWSGVSIQDWWHNEQLWIIGGVSSHLFAVFQGLLKVVTGVDADCFARAKAKGDTHFYLFKWTNLLIPPTTLIILNVVGIVAGISDAVNNGYGSWGPLFGKLFLAFWVIVHLHPFLKGLMGKNRTPTIVVLWSLLVALVLSMLWVRIDPFLPKKTGPVLEQCGVEC 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3180 804 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 202 359 IPR029044 -
Prci3g3180 804 Pfam Cellulose synthase 74 797 IPR005150 GO:0016020|GO:0016760|GO:0030244
Prci3g3180 804 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 768 - -
Prci3g3180 804 Coils Coil 172 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3180 Prci-Chr3 42967547 42970847 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3180 2 804 Cell Wall Biosynthesis AT5G17420 63.504 0.0 1078
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3180 K10999 - nnu:104600956 1230.7