Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3140 ATGAACAGGGTGCAGAACAAACAGATTCACAATATTGAGAAACCTTTTCCGGGATGCCTGGGAAGAATGGCAAACCTCTTTGATTTGACTACAGGTGTAACTGGAAACAGGCTACTCGCAGACAAGCCACATCATGATGCCTCGCTTTCAAGGAGCCAATCTGATGTTACAGGGATCTTGAGTCCTCCTCTTGGCGATCAGATTGAAGATAAACTGATCCTTTCCAACTTAGCTAGAACATTTTCAAAGAACAATATAAATGGGACGCCCATCAAGATGCTCATAGACCAAGAAATGTCAAAAGACATTGACTCTAAGCGCAGCCCACCCAATGTAGTTGCCAGATTAATGGGGCTTGAGGCCTTTCCTCATGAAGATCCTAATCTAGTTGTGCAAAAGAGCCATAGAAAAGATTTTACTCAACATACATGTGGTCATTCAGAAAAACCATCCAGACATTGGCAGCTGGAAGGTAGTTTTATGGACAAGCAAATGGTACATGAGGTTCATAACACCACAAAGCAGGTTGATTACAAGGATATTCATGAAATATGGCATCAACCTAGGAGCACTAGCCATGTTAGAGAAAAGACACCAGAGAGAGGAAGGCGAAATCAAAGTCAAAAAATTATGGAAGCAAGCCATCTGTCTTCAGATGAGACGATGTGCCAGTCCAAGGAAGTTGAAGGTGCCTTGGAAGTTTTAAGTTCCAATAAAGATTTATTACTTAAGTTTCTGGCTTCTCAAAATCTTTGTGAATTTCAGTCTACACCACCACCTGAGACAAAGCGGATAACTATTCTTAAACCTTCAAAGATGATGGACAATGACAAATCTCCTTGTAAGGTGAAGAATGATAAACCAGTCAAGAAACCAGCTAACGTTGGGCAAGCAGCTGTATGGGACAAAAGGAATCATGGATACTCTCTAGCCAGTCAGAGGGTTGACGAGTATCCAGCTCAACCTACTCGAATAGTGGTATTGAAGCCTAGCTTTGGGAAGATACATGAGAGTAAGGCCGTGGTTACTCCAACTTCATCCTCATCTCAAGATCTGCAAATTGGAAGCTTCTATCAGGAACCTGGAAATGATGCACTAGGGTCAAGAAAGGCAGCACAAGAGAGCACAGAGCAAATGCAAGAAAATCCTCAGGGTCTTCATAGAGACGAAACTTTGTATTCATCAGTCTTTTCCAATGGCTATACTGGTGATGAGAGCTCATTCAATCAATCAGAAAATGAGTATGCAGCAGGGAATTATAGTGATTCAGAATTTATGTCTCCATCTCCAAGGCATTCTTGGGATTACATCAATCGTACTGGTAGTCCTTATTCTTCATCATCCTTCGGCCGTGCATCCATTTCTCTGGAATCATCAGTGTGCAGAGAGGCAAAGAAACGACTCTCTGAAAGATGGGCCATGATGGCATCAAATATGAATCCTCAGGAACAGAATCAAGCAAGGAGAAGTTCTACCCTAGGTGAGATGCTTGCTCTTTCTGACATGAAGAAATCTGCAGTTTCTCAGGCTGAGGTTGTTATCAAAGACCAAGAACCAAGGGAATCTGTTTCCTGCAAAAATAATTTCGATGAAGAACATGTGGGTGATTCTCCGAAAAATCTTTTCAGGTCAAAGTCTGTCCCTGTATCTTCTAATGTCTATGAAACTGCGTTCAATGTTGAAGTTTACAATTCAGAGGTTGGCAATATGCCTATTTCCAAGAAATTGTCAAAGTCAAAGAGCTTGAAATCATCATTTAAAGGGAAAGTTACAAGTTTGTTCTTCTCGAGGAACAAAAGGTCAAGTAAAGAAAGATCCAGTCTGTCTGAATCTAAAAATGAATCCCAATCCACTGTTGTTGAAACGTCAAAATCTCCATCAAATTTCCCTGGGATCCGTGGAGATGATTTGTCTCGGAGCTTCAACAGTGGTGGCTTTGGAGACCGTTCTCTTCATTCTCTTTGTGATCCATCAAGTAAATCTTCATCACATTCAGTCTCAAAGGGACAAAAAGGCCTAATTTCTCTAGAGGACCAGCCAAGTCCAATTTCAGTTTTAGAACCTCCATTTGAAGATGATAATGCAGCCCGAGAATCCTCTGACTGTATGAAGGCCGGTCAATTGGGTGAACAGGGACACTTGAAGTCTAATTTAATTGACAAATCACCACCTATAGAATCTGTAGCCCGGATCCTGTCATGGGATGGTTCTTGTGCAGAGGTAGCAAGTTCGGATCCACTAAAACCATTGATGACTTCCCTCGATCCAGTGGCAGAGGAACAAGACAGTCTTGTGTTGGTCCAGAAACTACTATCAGTGTCTGGCCTTGATGATCAAGTGCTGTCAGACTCGTTTTACTCTAGATGGTATTCCCCTGAGAGCCCATTGGACCCAACATTGAGGGACAGATATGCGAATCTGAACGGCCAGGAGCCTCTCCAGGAGGCCAAACGAAGGCAGCAAAGATCAACTCAGATGCTTATATTTGACTATGTTAGTGCTGTGTTAATGGAAATTAGTGGTTACGGGTCAGAAAAGTACTTAATGAGAAGGATGTGCAGGCAGCCAGAGGGTGCATCTACCCTACTGATGGACCTCATTTTGTCCCAAACGAAGGAAATGACATCTAGTGGGATGAAGTTTGATTGGGGGGATGGTGGGGACAGCAACGGCATGATGGTAGAAATGGTTGTTAGGAAGGAGGTTGCGGGGAAGGGATGGTTTGAACTCAAGGGATTGGAGATTGATCTTCTAGGCAGGGAAATAGAAGGGAAGATGCTGGAAGAGCTTGTAGAGGAGGCTGTTGTTGATTTGACTGGTAGGATCTATTACATTTGA 2838 0.4274 MNRVQNKQIHNIEKPFPGCLGRMANLFDLTTGVTGNRLLADKPHHDASLSRSQSDVTGILSPPLGDQIEDKLILSNLARTFSKNNINGTPIKMLIDQEMSKDIDSKRSPPNVVARLMGLEAFPHEDPNLVVQKSHRKDFTQHTCGHSEKPSRHWQLEGSFMDKQMVHEVHNTTKQVDYKDIHEIWHQPRSTSHVREKTPERGRRNQSQKIMEASHLSSDETMCQSKEVEGALEVLSSNKDLLLKFLASQNLCEFQSTPPPETKRITILKPSKMMDNDKSPCKVKNDKPVKKPANVGQAAVWDKRNHGYSLASQRVDEYPAQPTRIVVLKPSFGKIHESKAVVTPTSSSSQDLQIGSFYQEPGNDALGSRKAAQESTEQMQENPQGLHRDETLYSSVFSNGYTGDESSFNQSENEYAAGNYSDSEFMSPSPRHSWDYINRTGSPYSSSSFGRASISLESSVCREAKKRLSERWAMMASNMNPQEQNQARRSSTLGEMLALSDMKKSAVSQAEVVIKDQEPRESVSCKNNFDEEHVGDSPKNLFRSKSVPVSSNVYETAFNVEVYNSEVGNMPISKKLSKSKSLKSSFKGKVTSLFFSRNKRSSKERSSLSESKNESQSTVVETSKSPSNFPGIRGDDLSRSFNSGGFGDRSLHSLCDPSSKSSSHSVSKGQKGLISLEDQPSPISVLEPPFEDDNAARESSDCMKAGQLGEQGHLKSNLIDKSPPIESVARILSWDGSCAEVASSDPLKPLMTSLDPVAEEQDSLVLVQKLLSVSGLDDQVLSDSFYSRWYSPESPLDPTLRDRYANLNGQEPLQEAKRRQQRSTQMLIFDYVSAVLMEISGYGSEKYLMRRMCRQPEGASTLLMDLILSQTKEMTSSGMKFDWGDGGDSNGMMVEMVVRKEVAGKGWFELKGLEIDLLGREIEGKMLEELVEEAVVDLTGRIYYI 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3140 945 MobiDBLite consensus disorder prediction 369 389 - -
Prci3g3140 945 MobiDBLite consensus disorder prediction 611 629 - -
Prci3g3140 945 MobiDBLite consensus disorder prediction 188 208 - -
Prci3g3140 945 MobiDBLite consensus disorder prediction 340 357 - -
Prci3g3140 945 MobiDBLite consensus disorder prediction 654 674 - -
Prci3g3140 945 Pfam Domain of unknown function (DUF4378) 767 933 IPR025486 -
Prci3g3140 945 Pfam Protein of unknown function (DUF3741) 207 250 IPR022212 -
Prci3g3140 945 MobiDBLite consensus disorder prediction 339 389 - -
Prci3g3140 945 MobiDBLite consensus disorder prediction 601 636 - -
Prci3g3140 945 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 941 - -
Prci3g3140 945 MobiDBLite consensus disorder prediction 188 209 - -
Prci3g3140 945 MobiDBLite consensus disorder prediction 652 687 - -
Prci3g3140 945 MobiDBLite consensus disorder prediction 518 539 - -
Prci3g3140 945 MobiDBLite consensus disorder prediction 272 296 - -
Prci3g3140 945 Pfam DUF761-associated sequence motif 109 124 IPR032795 -
Prci3g3140 945 MobiDBLite consensus disorder prediction 272 289 - -
Prci3g3140 945 MobiDBLite consensus disorder prediction 518 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3140 Prci-Chr3 42645542 42650741 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3140 1 939 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 40.283 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3140 - - gmx:100816611 1088.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2619 1 45679804 45685863 Prci3g3140 3 42645542 42650741 CCT
Prci3g3140 3 42645542 42650741 Prci3g3140 3 42645542 42650741 ECH