LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci3g3139	ATGAACAGGGTGCAGAACAAACAGATTCACAATATTGAGAAACCTTTTCCGGGATGCCTGGGAAGAATGGCAAACCTCTTTGATTTGACTACAGGTGTAACTGGAAACAGGCTACTCGCAGACAAGCCACATCATGATGCCTCGCTTTCAAGGAGCCAATCTGATGTTACAGGGATCTTGAGTCCTCCTCTTGGCGATCAGATTGAAGATAAACTGATCCTTTCCAACTTAGCTAGAACATTTTCAAAGAACAATATAAATGGGACGCCCATCAAGATGCTCATAGACCAAGAAATGTCAAAAGACATTGACTCTAAGCGCAGCCCACCCAATGTAGTTGCCAGATTAATGGGGCTTGAGGCCTTTCCTCATGAAGATCCTAATCTAGTTGTGCAAAAGAGCCATAGAAAAGATTTTACTCAACATACATGTGGTCATTCAGAAAAACCATCCAGACATTGGCAGCTGGAAGGTAGTTTTATGGACAAGCAAATGGTACATGAGGTTCATAACACCACAAAGCAGGTTGATTACAAGGATATTCATGAAATATGGCATCAACCTAGGAGCACTAGCCATGTTAGAGAAAAGACACCAGAGAGAGGAAGGCGAAATCAAAGTCAAAAAATTATGGAAGCAAGCCATCTGTCTTCAGATGAGACGATGTGCCAGTCCAAGGAAGTTGAAGGTGCCTTGGAAGTTTTAAGTTCCAATAAAGATTTATTACTTAAGTTTCTGGCTTCTCAAAATCTTTGTGAATTTCAGTCTACACCACCACCTGAGACAAAGCGGATAACTATTCTTAAACCTTCAAAGATGATGGACAATGACAAATCTCCTTGTAAGGTGAAGAATGATAAACCAGTCAAGAAACCAGCTAACGTTGGGCAAGCAGCTGTATGGGACAAAAGGAATCATGGATACTCTCTAGCCAGTCAGAGGGTTGACGAGTATCCAGCTCAACCTACTCGAATAGTGGTATTGAAGCCTAGCTTTGGGAAGATACATGAGAGTAAGGCCGTGGTTACTCCAACTTCATCCTCATCTCAAGATCTGCAAATTGGAAGCTTCTATCAGGAACCTGGAAATGATGCACTAGGGTCAAGAAAGGCAGCACAAGAGAGCACAGAGCAAATGCAAGAAAATCCTCAGGGTCTTCATAGAGACGAAACTTTGTATTCATCAGTCTTTTCCAATGGCTATACTGGTGATGAGAGCTCATTCAATCAATCAGAAAATGAGTATGCAGCAGGGAATTATAGTGATTCAGAATTTATGTCTCCATCTCCAAGGCATTCTTGGGATTACATCAATCGTACTGGTAGTCCTTATTCTTCATCATCCTTCGGCCGTGCATCCATTTCTCTGGAATCATCAGTGTGCAGAGAGGCAAAGAAACGACTCTCTGAAAGATGGGCCATGATGGCATCAAATATGAATCCTCAGGAACAGAATCAAGCAAGGAGAAGTTCTACCCTAGGTGAGATGCTTGCTCTTTCTGACATGAAGAAATCTGCAGTTTCTCAGGCTGAGGTTGTTATCAAAGACCAAGAACCAAGGGAATCTGTTTCCTGCAAAAATAATTTCGATGAAGAACATGTGGGTGATTCTCCGAAAAATCTTTTCAGGTCAAAGTCTGTCCCTGTATCTTCTAATGTCTATGAAACTGCGTTCAATGTTGAAGTTTACAATTCAGAGGTTGGCAATATGCCTATTTCCAAGAAATTGTCAAAGTCAAAGAGCTTGAAATCATCATTTAAAGGGAAAGTTACAAGTTTGTTCTTCTCGAGGAACAAAAGGTCAAGTAAAGAAAGATCCAGTCTGTCTGAATCTAAAAATGAATCCCAATCCACTGTTGTTGAAACGTCAAAATCTCCATCAAATTTCCCTGGGATCCGTGGAGATGATTTGTCTCGGAGCTTCAACAGTGGTGGCTTTGGAGACCGTTCTCTTCATTCTCTTTGTGATCCATCAAGTAAATCTTCATCACATTCAGTCTCAAAGGGACAAAAAGGCCTAATTTCTCTAGAGCCTGGATTGACTGTGTCAAAGCCTGGTGCTCTGGGCATGTCAAACCAAATCCAGGACCAGCCAAGTCCAATTTCAGTTTTAGAACCTCCATTTGAAGATGATAATGCAGCCCGAGAATCCTCTGACTGTATGAAGGCCGGTCAATTGGGTGAACAGGGACACTTGAAGTCTAATTTAATTGACAAATCACCACCTATAGAATCTGTAGCCCGGATCCTGTCATGGGATGGTTCTTGTGCAGAGGTAGCAAGTTCGGATCCACTAAAACCATTGATGACTTCCCTCGATCCAGTGGCAGAGGAACAAGACAGTCTTGTGTTGGTCCAGAAACTACTATCAGTGTCTGGCCTTGATGATCAAGTGCTGTCAGACTCGTTTTACTCTAGATGGTATTCCCCTGAGAGCCCATTGGACCCAACATTGAGGGACAGATATGCGAATCTGAACGGCCAGGAGCCTCTCCAGGAGGCCAAACGAAGGCAGCAAAGATCAACTCAGATGCTTATATTTGACTATGTTAGTGCTGTGTTAATGGAAATTAGTGGTTACGGGTCAGAAAAGTACTTAATGAGAAGGATGTGCAGGCAGCCAGAGGGTGCATCTACCCTACTGATGGACCTCATTTTGTCCCAAACGAAGGAAATGACATCTAGTGGGATGAAGTTTGATTGGGGGGATGGTGGGGACAGCAACGGCATGATGGTAGAAATGGTTGTTAGGAAGGAGGTTGCGGGGAAGGGATGGTTTGAACTCAAGGGATTGGAGATTGATCTTCTAGGCAGGGAAATAGAAGGGAAGATGCTGGAAGAGCTTGTAGAGGAGGCTGTTGTTGATTTGACTGTTGCCTTTGCGTAA	2886	0.43	MNRVQNKQIHNIEKPFPGCLGRMANLFDLTTGVTGNRLLADKPHHDASLSRSQSDVTGILSPPLGDQIEDKLILSNLARTFSKNNINGTPIKMLIDQEMSKDIDSKRSPPNVVARLMGLEAFPHEDPNLVVQKSHRKDFTQHTCGHSEKPSRHWQLEGSFMDKQMVHEVHNTTKQVDYKDIHEIWHQPRSTSHVREKTPERGRRNQSQKIMEASHLSSDETMCQSKEVEGALEVLSSNKDLLLKFLASQNLCEFQSTPPPETKRITILKPSKMMDNDKSPCKVKNDKPVKKPANVGQAAVWDKRNHGYSLASQRVDEYPAQPTRIVVLKPSFGKIHESKAVVTPTSSSSQDLQIGSFYQEPGNDALGSRKAAQESTEQMQENPQGLHRDETLYSSVFSNGYTGDESSFNQSENEYAAGNYSDSEFMSPSPRHSWDYINRTGSPYSSSSFGRASISLESSVCREAKKRLSERWAMMASNMNPQEQNQARRSSTLGEMLALSDMKKSAVSQAEVVIKDQEPRESVSCKNNFDEEHVGDSPKNLFRSKSVPVSSNVYETAFNVEVYNSEVGNMPISKKLSKSKSLKSSFKGKVTSLFFSRNKRSSKERSSLSESKNESQSTVVETSKSPSNFPGIRGDDLSRSFNSGGFGDRSLHSLCDPSSKSSSHSVSKGQKGLISLEPGLTVSKPGALGMSNQIQDQPSPISVLEPPFEDDNAARESSDCMKAGQLGEQGHLKSNLIDKSPPIESVARILSWDGSCAEVASSDPLKPLMTSLDPVAEEQDSLVLVQKLLSVSGLDDQVLSDSFYSRWYSPESPLDPTLRDRYANLNGQEPLQEAKRRQQRSTQMLIFDYVSAVLMEISGYGSEKYLMRRMCRQPEGASTLLMDLILSQTKEMTSSGMKFDWGDGGDSNGMMVEMVVRKEVAGKGWFELKGLEIDLLGREIEGKMLEELVEEAVVDLTVAFA	961

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci3g3139	961	MobiDBLite	consensus disorder prediction	188	208	-	-
	Prci3g3139	961	MobiDBLite	consensus disorder prediction	369	389	-	-
	Prci3g3139	961	MobiDBLite	consensus disorder prediction	611	629	-	-
	Prci3g3139	961	MobiDBLite	consensus disorder prediction	340	357	-	-
	Prci3g3139	961	MobiDBLite	consensus disorder prediction	652	671	-	-
	Prci3g3139	961	PANTHER	M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED	1	958	-	-
	Prci3g3139	961	MobiDBLite	consensus disorder prediction	601	643	-	-
	Prci3g3139	961	MobiDBLite	consensus disorder prediction	686	700	-	-
	Prci3g3139	961	MobiDBLite	consensus disorder prediction	677	700	-	-
	Prci3g3139	961	MobiDBLite	consensus disorder prediction	339	389	-	-
	Prci3g3139	961	Pfam	Protein of unknown function (DUF3741)	207	250	IPR022212	-
	Prci3g3139	961	MobiDBLite	consensus disorder prediction	654	670	-	-
	Prci3g3139	961	Pfam	Domain of unknown function (DUF4378)	785	951	IPR025486	-
	Prci3g3139	961	MobiDBLite	consensus disorder prediction	188	209	-	-
	Prci3g3139	961	MobiDBLite	consensus disorder prediction	518	539	-	-
	Prci3g3139	961	MobiDBLite	consensus disorder prediction	272	296	-	-
	Prci3g3139	961	Pfam	DUF761-associated sequence motif	109	124	IPR032795	-
	Prci3g3139	961	MobiDBLite	consensus disorder prediction	272	289	-	-
	Prci3g3139	961	MobiDBLite	consensus disorder prediction	518	542	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci3g3139	Prci-Chr3	42645262	42650741	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci3g3139	1	957	TRM (TON1 Recruiting Motif) Superfamily	AT4G28760	40.804	0.0	588

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci3g3139	-		-	gmx:100816611	1113.21