Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3136 ATGGAAGGTGATAATTCAGCAAGAAGGGAATTAACGGCGCTGGTTGTAGACGATCAAGAAATGTTGAGGAAGATCCACGAGACAATGTTGAACCGTGTTGGAGTGAGAAACGTGGAGGCTGTCAATAATGGAAAAGAAGCCGTGGACATTCACAGAGCAGGCCGAAGTTTTGACCTAATTCTCATGGACTTGGACATGCCTGTCATGAGTGGCGTCGAGGCGACGAGAGAACTCCGAGCAATGCGAGTCAGAAGCAAGATCGCAGGCGTATCGACGAGAATCGACGAAGCACGAGTTCAGGAGTTCATGGAAGCTGGCATCGATGTCTTCATTGACAAACCCTTGACCTCTGATAAGCTCTCCTCACTTCTTCGCCATATCAACCCTCTTTGA 393 0.486 MEGDNSARRELTALVVDDQEMLRKIHETMLNRVGVRNVEAVNNGKEAVDIHRAGRSFDLILMDLDMPVMSGVEATRELRAMRVRSKIAGVSTRIDEARVQEFMEAGIDVFIDKPLTSDKLSSLLRHINPL 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3136 130 SUPERFAMILY CheY-like 10 127 IPR011006 -
Prci3g3136 130 SMART REC_2 11 124 IPR001789 GO:0000160
Prci3g3136 130 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 127 - -
Prci3g3136 130 Gene3D - 1 129 - -
Prci3g3136 130 Pfam Response regulator receiver domain 14 123 IPR001789 GO:0000160
Prci3g3136 130 ProSiteProfiles Response regulatory domain profile. 12 128 IPR001789 GO:0000160
Prci3g3136 130 CDD REC_hyHK_CKI1_RcsC-like 14 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3136 Prci-Chr3 42608177 42609133 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3136 8 127 Response Regulator Gene Family AT3G04280 41.803 2.23e-25 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci3g3136 Response_reg 3e-24 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3136 - - rcu:8262779 144.821