Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3125 ATGGGAGACGGAGCAGTTTGCGTCGAATCATTAGCAGATAGAACAGGTGAAGACGATGAGTTATCAAGAACGGACCTGAAGAGGGACTGCCAATGTTTTACTGATACTGAACTTGACCCCTCCCCTAATAAGAAACAAGCGAAGGAAGTCTCAAACGACGACGTGCGCTCTGAGGTTTCCAATCCCAATATTTCTTCAAAAGAGAATGTTTTAGCTTTTCAAGATATTAGTAGCCAGCCGAGCGAGTTGGCAAATACTAATCAAGCAGAGTGTGGGGAAGTAACGTCTACTTGTTTGGAGAATTCAAGCTCGGACGAGACCTTGAGTGATGGCGGGGGTGATCATAATACTATTTCCCAGAATGATAAGGGCGCGAGCAGTGCTGAAATGACGTCCTGTGTTGTACTGGAAATTCCCAAGCATGCCAGTGCATCTGGAATTAGAAAGATTACTTTTAAGTTCAGTAAAAAGAAGGAGGACTATGACTATCAGTCACTTGCTAGTACTGATAGGAATCCTTACGACGATGAGGCTTTGTTAAGTTCTGATTATAAGTCGGGGATGTTAGATAGCTCTTACGGGATGGAATATGTTCAAGCTGGTGATTTCAACTCGTACGCTCGAAATATGGAGTTGAAAATGTCAAAGAAGGTAGTTCCTAGCTGTTATCCTACAAATGTTAAGAAGCTGCTAGCAACTGGTATTCTTGATGGAGCTCGAGTGAAGTACATTTATACTCATGGCGCAGGAAAGATCGAGCTGCCTGGGATTATTCAGGGTGGTGGATATATGTGTGGCTGCTCGCTGTGCAGTTTCTCCAAAGTTCTAAGTGCGTATGAGTTTGAGCAGCATGCTGGTGCCAAGACTAGACATCCCAATAATCACATATTCCTGGAAAATGGAAAACCAATATATAGTATTATACAGGAAATAAAAACTGCTCCACTGAGCCTATTAGATGAGGTTATAAAGAACGTTGCTGGTTCATCTGTCAATGAAGAGTCCTTCCAGGTTTGGAAAGCAAGTCTTTTGCAAAGCAATGGGCAGGTTGGGGCGGACAATTTTTGTAACTCCAAGCTTGTTGGCCTGCCTCATACAAACATAAGTGAATTTGTAGATGGTGTGAGCTACATGTCTTGTTCAGATGTGCTGAGTCCTGTTGAGCAACAAAGTCATGAAAAGCAGACAACTGACGAGAGGAAACATGTGAAAAAATCAAGCTCCCATACTTCTAACTTGGGTCTACAGCAAAAGAAAAATGTAGATGGTTGCAATAAGAGAAGGGATAATGATTTGCATAGGCTACTTTTTATGCCAAATGGACTACCAGATGGTGCTGAATTGGCTTACTATGTCAAAGGACAGAAACTACTTGGAGGTTACAAACAGGGAAATGGTATAGTTTGTGGTTGTTGTGATAGAGAGATAAGCCCTTCCCAGTTTGAAGCTCATGCTGGAATGGCTGCCCGACGTCAACCTTATCGCCATATATATACTTCCAACGGATTAACACTTCACGATATAGCCCTCTCATTAGCAAATGGTCAAAACCTTACCACTGGAGATAGTGATGACATGTGCGCTATATGCGGAGATGGTGGAGATTTGATTCCTTGCAATGGATGCCCTAGGGCTTTTCATGCAGTTTGCTTAGGTTTACAATGTGCTCCAGAAAGCTGTTGGCTTTGTCAAACTTGTAGAGATATTGCTGGTTGCAGCAGAATATCTTCTACAGCAAGGCCAATTAAGATAAGGTTGACCCGGGTTGTTAAAGCACCTGAATTTGAAATGGGTGGTTGTGTTGTTTGTAGGGAGCATGATTTTAGTGTCGCTAAATTTGATGAGCGAACAGTTATAATTTGTGATCAGTGTGAGAAGGAGTATCATGTTGGGTGCTTGCGGGACAGTGGGCTATGTGAGTTGGAAGAATTGCCCAAGGACAAGTGGTTTTGTTGTGATGACTGCAATCGAATATATGTGGCCCTGCAAAATTCAGTTTCTGCTGGAGCAGAGGTTATACCACCTTGCTTGTCAGTCCTAATAAATAGGAAGCGTGAGGAGAGGGGCTTGCCTATTGATGGAGGAGGCATTGATGATATCCAGTGGCGAATTCTAAGCGGAAAAAGTCGTTATCCTGAACACTTACCATTACTTTCACGGGCAGCTGCAATTTTTCGAGAGTGTTTTGATCCCATTGTTGCAGTCTCTGGTCGTGACTTGATTCCTGTTATGGTCTACGGGAGAAATATTTCAGGCCAAGAGTTTGGGGGGATGTATTGTGTTGTTTTAATAGTGAAATCTGTTGTTGTATCTGCTGGGCTACTTAGGATTTTTGGACGTCATGTTGCTGAGCTTCCAATGGTTGCTACAAGTAGAGAACATCAAGGAAAAGGCTATTTTCAAGTGTTATTCTCTTGCATAGAGAAGCTGCTGTTGTCCCTGAAGGTGGAAAAGCTGGTGCTTCCTGCAGCTGAGGATGCTGAATCAATTTGGACTAGAAAACTAGGCTTCCGAAAGCTGACTGAAGATCAGTTATCCAAATATCTGAGAGAGGTACAGCTCACCCTCTTCAATAAGACTTCGATGCTGGAGAAGACAGTGCAGGTGGCGATGGAATGA 2619 0.4303 MGDGAVCVESLADRTGEDDELSRTDLKRDCQCFTDTELDPSPNKKQAKEVSNDDVRSEVSNPNISSKENVLAFQDISSQPSELANTNQAECGEVTSTCLENSSSDETLSDGGGDHNTISQNDKGASSAEMTSCVVLEIPKHASASGIRKITFKFSKKKEDYDYQSLASTDRNPYDDEALLSSDYKSGMLDSSYGMEYVQAGDFNSYARNMELKMSKKVVPSCYPTNVKKLLATGILDGARVKYIYTHGAGKIELPGIIQGGGYMCGCSLCSFSKVLSAYEFEQHAGAKTRHPNNHIFLENGKPIYSIIQEIKTAPLSLLDEVIKNVAGSSVNEESFQVWKASLLQSNGQVGADNFCNSKLVGLPHTNISEFVDGVSYMSCSDVLSPVEQQSHEKQTTDERKHVKKSSSHTSNLGLQQKKNVDGCNKRRDNDLHRLLFMPNGLPDGAELAYYVKGQKLLGGYKQGNGIVCGCCDREISPSQFEAHAGMAARRQPYRHIYTSNGLTLHDIALSLANGQNLTTGDSDDMCAICGDGGDLIPCNGCPRAFHAVCLGLQCAPESCWLCQTCRDIAGCSRISSTARPIKIRLTRVVKAPEFEMGGCVVCREHDFSVAKFDERTVIICDQCEKEYHVGCLRDSGLCELEELPKDKWFCCDDCNRIYVALQNSVSAGAEVIPPCLSVLINRKREERGLPIDGGGIDDIQWRILSGKSRYPEHLPLLSRAAAIFRECFDPIVAVSGRDLIPVMVYGRNISGQEFGGMYCVVLIVKSVVVSAGLLRIFGRHVAELPMVATSREHQGKGYFQVLFSCIEKLLLSLKVEKLVLPAAEDAESIWTRKLGFRKLTEDQLSKYLREVQLTLFNKTSMLEKTVQVAME 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3125 872 MobiDBLite consensus disorder prediction 1 69 - -
Prci3g3125 872 ProSiteProfiles Zinc finger PHD-type profile. 597 658 IPR019787 -
Prci3g3125 872 MobiDBLite consensus disorder prediction 41 55 - -
Prci3g3125 872 Gene3D - 748 855 - -
Prci3g3125 872 SUPERFAMILY FYVE/PHD zinc finger 512 567 IPR011011 -
Prci3g3125 872 Pfam Tify domain binding domain 256 310 IPR032308 -
Prci3g3125 872 Pfam Tify domain binding domain 460 509 IPR032308 -
Prci3g3125 872 SUPERFAMILY FYVE/PHD zinc finger 598 653 IPR011011 -
Prci3g3125 872 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 751 842 IPR016181 -
Prci3g3125 872 ProSitePatterns Zinc finger PHD-type signature. 527 566 IPR019786 -
Prci3g3125 872 ProSiteProfiles Zinc finger PHD-type profile. 524 569 IPR019787 -
Prci3g3125 872 MobiDBLite consensus disorder prediction 392 406 - -
Prci3g3125 872 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 709 859 IPR000182 GO:0016747
Prci3g3125 872 MobiDBLite consensus disorder prediction 388 424 - -
Prci3g3125 872 MobiDBLite consensus disorder prediction 100 124 - -
Prci3g3125 872 FunFam PHD zinc finger protein 748 855 - -
Prci3g3125 872 ProSitePatterns Zinc finger PHD-type signature. 600 655 IPR019786 -
Prci3g3125 872 MobiDBLite consensus disorder prediction 12 34 - -
Prci3g3125 872 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein 514 592 - -
Prci3g3125 872 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 597 658 IPR013083 -
Prci3g3125 872 SMART PHD_3 599 656 IPR001965 -
Prci3g3125 872 SMART PHD_3 526 567 IPR001965 -
Prci3g3125 872 FunFam PHD zinc finger protein 598 658 - -
Prci3g3125 872 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 514 596 IPR013083 -
Prci3g3125 872 PANTHER AUTOIMMUNE REGULATOR 14 866 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3125 Prci-Chr3 42467191 42476273 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3125 1 867 PHD Transcription Factor Family AT3G53680 53.950 0.0 902
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3125 - - gmx:100808999 1315.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g3125 3 42467191 42476273 Prci3g3125 3 42467191 42476273 ECH