Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3116 ATGGAGAACCAGAAACCCAGTTGGTTTGAAAGAATGAAGCCATTCATGGCTGTAGTATTCTTGCAGACTGGGTTTGCAGGCATGGATGTTCTATCCAAGGCTGCATTGAACAAGGGGATGAGCAATTACGTGCTTGTCGTCTACCGTCATGTTGTCGCCTTTTTTGTCATCGTGCCTTTTGCAGTGATCCTGGACAAGAAAGTTAGGCCAAAGATGACATTTTCAATCTTCATGAAGATAGTGGCGCTCAGTGTGCTAGAGCCAGTTATTGACCAAAATTTGTACTTTCTGGGAATGAAATATACAACGGCAACGTTTGCCGCCGCAATGACTAATATCCTTCCCGCCATCACCTTCATCATGGCCTGCATTCTTAGGCTTGAGAAGTTGAAAATAAGAAGCATACGCAGCCAAGCCAAGGTGTTTGGTACTCTAGCAACTGTTGCTGGAGCCATGGTCATGACATTGATGAAAGGTCCGGTGCTTGAGTTATTTGGAACACATGGAAATAGCAGCAACAGCCACTATACCGGCAGGGCAAATCTTCAACACGCAATAAAGGGATCAATCATGATCACAATAGGCTGCTTTAGCTGGGCTTGTTTCATGATCCTCCAAGCAATTACTCTTGAAACTTACCCAGCTGAGCTCTCTCTTACAGCATGGATATGCCTGCTAGGATCAGTTGAAGGTGCCGTGGCTGCCCTGGTTATGGAAAGGGGCAACCCTTCGATTTGGTCTTTAAATTGGGACACAAAACTGCTGGCTGCTGTCTATAGTGGCATTGTCTGCTCAGGAATGGCTTATTACATCCAAGGGGTTGTGATGAAAACTAGAGGCCCAGTATTTGTTACTGCGTTTAGCCCCCTCTGCATGGTAATTGTCGCTATCATGGGCTCCATCATTCTAGCTGAGCAATTGTACCTTGGAAGGGTGATCGGTGCCATTGTCATTGTTTCGGGTTTGTACCTTGTGGTGTGGGGTAAAAGCAAAGATTACGATTCACTAACCCCAATCCCCAAGGAGCACATACTGCCAGACAAGTTCAGCTCAGGTGAGGGAAATGCCCGAACTGAGCACTCCAAACATGAGGTCATCACTATCATCAATTTTGAAGCAGCAATCAGGACTAGAGAGGAACAAGTATGA 1149 0.4595 MENQKPSWFERMKPFMAVVFLQTGFAGMDVLSKAALNKGMSNYVLVVYRHVVAFFVIVPFAVILDKKVRPKMTFSIFMKIVALSVLEPVIDQNLYFLGMKYTTATFAAAMTNILPAITFIMACILRLEKLKIRSIRSQAKVFGTLATVAGAMVMTLMKGPVLELFGTHGNSSNSHYTGRANLQHAIKGSIMITIGCFSWACFMILQAITLETYPAELSLTAWICLLGSVEGAVAALVMERGNPSIWSLNWDTKLLAAVYSGIVCSGMAYYIQGVVMKTRGPVFVTAFSPLCMVIVAIMGSIILAEQLYLGRVIGAIVIVSGLYLVVWGKSKDYDSLTPIPKEHILPDKFSSGEGNARTEHSKHEVITIINFEAAIRTREEQV 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3116 382 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020
Prci3g3116 382 Pfam EamA-like transporter family 24 154 IPR000620 GO:0016020
Prci3g3116 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 234 331 - -
Prci3g3116 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Prci3g3116 382 PANTHER WAT1-RELATED PROTEIN 13 333 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3116 Prci-Chr3 42407003 42410244 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3116 2 382 Nodulin-like Gene Family AT2G37460 64.752 1.22e-178 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3116 - - pcin:129305629 683.33