Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3112 ATGGAGACGCAGCGAATTATCGAATTTCCTCATCAGAACATGGACAAGCGCCCCAGGAAGAGACCTCGTCTAACATGGGACATGCCCCCTGCTATTCCTCCGGCTTCCAAGGCTCTTCCGGCTTTATACTGCAGCCAGGAACTTGCGAATGGAGTGCTTCCAAATCATGTATATTCTTCCGTGATCTACAGGGGAGTGCCTCGCAATGCATCACCTCCTTGGAGACCCGATGATAAAGATGGGCATTACGTTTTTGCTATTGGTGAAAATCTAACCTCACGATACAGAATTCTCAGTAAAATGGGTGAAGGGACGTTTGGCCAAGTCTTGGAATGTTTTGACAATGAAAAAGAGGAAGTTGTTGCAATCAAAGTTATTCGCTCCATACACAAGTATCGTGAGGCCGCAATGATTGAAATTGATGTTTTGCAGAGGCTTGCCAGGCATGACATTGGCAATGCACGTTGTGTGCAAATACGGAATTGGTTTGACTATCGTAATCATATTTGTATTGTATTTGAGAAGCTTGGGCCAAGCTTATACGATTTTCTCCGCAAAAACAGCTATCGTTCTTTTCCCATTGATCTTGTTCGGGAGTTTGGCAGACAACTTTTGGAGTCTGTAGCATTTATGCATGATTTACGATTGATTCACACTGATTTGAAGCCTGAGAATATTCTTCTTGTCTCATCAGACTATATTAAAGTGCCAGACTATAAGTTTCTGGCTCGAACAACAAAAGATGGCTATTATTTCAAAAACCTACCTAAGTCAAGTTCCATAAAACTCATTGACTTCGGGAGTACAACATTTGAACATCAGGATCACAGTTACGTGGTGTCAACCAGACACTATCGAGCACCAGAGGTTATCTTAGGTCTTGGGTGGAATTATCCTTGCGATCTCTGGAGTGTGGGGTGTATACTGGTTGAACTCTGCTCTGGTGAGGCCCTTTTTCAAACTCATGAGAACTTGGAGCATCTAGCTATGATGGAGAGAGTTTTGGGGCCACTACCTCCACATATGGTGGTCAGGGCTGACCGTCGAGCTGAGAAATATTTTAGAAGGGGTGCACGGTTGGGTTGGCCAGATAGTTCAACTTCAAGAGAAAGCATGAGGGCTGTCTGGAAATTGCCTCGCTTGCCGAACCTTATAATGCAGCATGTTGATCATTCTGCTGGCGATTTGATTGATCTTCTTCAAGGACTCCTTCGATATGACCCTGCTGAACGGTTCAAAGCAAGGGAAGCATTAAGACATCCCTTCTTCACTGGGGAAGCAAAACGTGTTTATCCTTTGTAA 1302 0.4416 METQRIIEFPHQNMDKRPRKRPRLTWDMPPAIPPASKALPALYCSQELANGVLPNHVYSSVIYRGVPRNASPPWRPDDKDGHYVFAIGENLTSRYRILSKMGEGTFGQVLECFDNEKEEVVAIKVIRSIHKYREAAMIEIDVLQRLARHDIGNARCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREFGRQLLESVAFMHDLRLIHTDLKPENILLVSSDYIKVPDYKFLARTTKDGYYFKNLPKSSSIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPPHMVVRADRRAEKYFRRGARLGWPDSSTSRESMRAVWKLPRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERFKAREALRHPFFTGEAKRVYPL 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3112 433 ProSiteProfiles Protein kinase domain profile. 95 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g3112 433 Gene3D Phosphorylase Kinase; domain 1 82 175 - -
Prci3g3112 433 CDD PKc_CLK 82 423 - -
Prci3g3112 433 FunFam Serine/threonine-protein kinase AFC2 171 423 - -
Prci3g3112 433 SMART serkin_6 95 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g3112 433 Gene3D Transferase(Phosphotransferase) domain 1 149 423 - -
Prci3g3112 433 Pfam Protein kinase domain 95 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g3112 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Prci3g3112 433 FunFam Serine/threonine-protein kinase AFC2 82 175 - -
Prci3g3112 433 SUPERFAMILY Protein kinase-like (PK-like) 82 429 IPR011009 -
Prci3g3112 433 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 2 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3112 Prci-Chr3 42364026 42368891 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3112 95 423 Core Cell Cycle Gene Families AT1G76540 26.901 3.48e-31 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Prci3g3112 Pkinase 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3112 K08287 - pvy:116106461 801.201