Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3107 ATGAGAGGCTTCTGCGTTCAACCCAGAACGTCGTCGTTCTCCGTTTCCCGTCATTCTCTGCCGTCGTCTCCTTATCGCAGCCCTGCTTCTAGTTTCGAAGAAGCTGAAGCTTTGATTCTGAAATGGAACGGCGAGACTTCTTCATATGCCAAAGTCACCTCTCTCTTCCACCACGACAAAACCGAGGCCACTCAGTATATCAAGTGCGTCAACCATCTCCACCGGCTCATGCACTCCCTGGACTCGCGACAACTCGTTCTCGCCCAGAACTTGATGCAGATGGCCATGAAGAGGCTTCAGAAGGAGTTCTACCAAATTCTCTCCATAAATCGCGCTCACCTGGATCCCGAATCTGTCTCTGTTAGATCCTCTCGGACCTCCATCAGCACCTCCGATTACGATGAAACTGATGATGGCTCGCCGGACCGCGAAATTCGAGAAGTAGGCGATTCGATCTCTGAAGTCGAACTGGTGTCTTCCATTGCCATGGAAAACCTGAGGTCGATTGCTGAGTGTATGATCTCATGCGGTTATTCAAAGGAATGTGCCAGCGTGTACGTAAGTATCAGGAAGTCGATCATCATTGAAGGCCTTTATCGTCTCAACGTTGACAAATTGAGCTCGTCCAAGATTCATAAGATGGATTGGGAAGCTCTCGAGTTGAAAATCAAGAGTTGGTTGGAGGCGGTGAACGTTTCGGTGAAGACGCTCTTCAACGGGGAGAGAATCTTATGCGACCATGTTTTTGGCGCTTCGCAATCCATTAGAGCATCTTGCTTCGCCGAAATTTCTAGTGATGGAGCCACTTGTCTGTTCCGATTACCCGAACTCGTCGCCAAATCAAAGAAATCGCCGCCGGAGAAGATATTTCGGATGCTGGACATGTACGCTGAATTATCTGCACTGTGGCCGGAGATCGAATCCATCTTTGCGTTCGATTCAACCTCTGCTATTCGATCTCAAGGGCTCACATCACTTACTCAGCTCAGCGAATCAGTGAGAACGGTGTTCTTAGAATTCGAGTCCACGATCAAAAAGCACTCTTCCAGGTCTTCGGTAAGCGACGGAGGCGTCCACCCACTGACAAAACAGGCAATGAGCTACCTCTCGCTTCTCACAGATTACGACAACACACTCTCTGACATGTTCGCCGGCTGGCCTTCTCTGCCAAATTTGCCGTTGCCATCGCCTCCGGAGACTTCCCGAGATAGTTCAGACTCCGATAACTCGTCAGCGCATCCTTCGTTCTCCGCGAGGATAGCTTGGCTAATTCTCGTCCTCCTTTGTAAACTGGACGGCAAAGCAGCGTATTACAAGGACGGTTCCTTGGGCTACTTGTTTCTCGCAAATAATCTGCATCATGTCATCGACAGAGTCCGCAACTCGACCTTGCAGACGGTCCTGGGCTACGAGTGGATAGTGAAGCACGAAGAGAAGATGAAATGGTTCGTAGCGAACTACGAGAAGGTGGCATGGGGGCAAGTCTTCTCGTCACTGCCTGAAAACCCAAAGGCGGCGTTATCGCCGGCGGAGGCGAAGGTGATGTTTGAGAACTTCAACTTCAATTTCGAGAAAGCATACCGGAAGCAGAACTCATTTGTGGTGGCAGATCGGACGCTGAGAGACGAAATCACGGGATCAATTGCGAGAAAAGTAGTCCCAGTTTATCGGGAATTTTATGATGCGCACAGGATTCTTGGGGGTTCGTGGAGAGAAATGAGAGAGCATGTCCCATTCACTCCCGAAGACGTGGCGAGTTACGTATCGAATCTCTTCTTTGCGAGGACGATCCAGTAG 1797 0.5003 MRGFCVQPRTSSFSVSRHSLPSSPYRSPASSFEEAEALILKWNGETSSYAKVTSLFHHDKTEATQYIKCVNHLHRLMHSLDSRQLVLAQNLMQMAMKRLQKEFYQILSINRAHLDPESVSVRSSRTSISTSDYDETDDGSPDREIREVGDSISEVELVSSIAMENLRSIAECMISCGYSKECASVYVSIRKSIIIEGLYRLNVDKLSSSKIHKMDWEALELKIKSWLEAVNVSVKTLFNGERILCDHVFGASQSIRASCFAEISSDGATCLFRLPELVAKSKKSPPEKIFRMLDMYAELSALWPEIESIFAFDSTSAIRSQGLTSLTQLSESVRTVFLEFESTIKKHSSRSSVSDGGVHPLTKQAMSYLSLLTDYDNTLSDMFAGWPSLPNLPLPSPPETSRDSSDSDNSSAHPSFSARIAWLILVLLCKLDGKAAYYKDGSLGYLFLANNLHHVIDRVRNSTLQTVLGYEWIVKHEEKMKWFVANYEKVAWGQVFSSLPENPKAALSPAEAKVMFENFNFNFEKAYRKQNSFVVADRTLRDEITGSIARKVVPVYREFYDAHRILGGSWREMREHVPFTPEDVASYVSNLFFARTIQ 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3107 598 Pfam Exo70 exocyst complex subunit 224 589 IPR046364 GO:0000145|GO:0005546|GO:0006887
Prci3g3107 598 Gene3D Exocyst complex component Exo70 47 597 - -
Prci3g3107 598 MobiDBLite consensus disorder prediction 120 134 - -
Prci3g3107 598 PANTHER EXOCYST COMPLEX PROTEIN EXO70 31 592 IPR004140 GO:0000145|GO:0006887
Prci3g3107 598 SUPERFAMILY Cullin repeat-like 27 592 IPR016159 -
Prci3g3107 598 MobiDBLite consensus disorder prediction 120 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3107 Prci-Chr3 42314803 42317220 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3107 32 592 EXO70 exocyst subunit family AT3G09520 51.134 0.0 557
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3107 K07195 - gmx:100786852 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g3107 3 42314803 42317220 Prci3g3107 3 42314803 42317220 ECH