Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3084 ATGGAAGCACCTTTAATTTCTTCAAAAAAAAAAAAAACGGGGGGTCAAGCAACCACCCCTTCTCGGTTCACTATAAAGAACCTTACACGCAGCGCGGATAAAAAGAAGGACGAAGAAAAACCGGTGACTTGCAGCACCATTGCAAAGTTCCATGTTGGATCCAAGTCCATAAAAAGGCACAGATTGGTCCTCAAAACTTTCACATTCAAGTCCCATTCTCAAATACCGGACTATCTTGAAAGCCAAGCGCGTGATCCCATGATGGAAGACAGCGCAACCATCTTAGCCGCACTCTCCACTCTCTCTCCTTCCCAACTCTCCCGTCTCTCTCTCTCCCTCCTCTCCGCCACCCACCGCCACAACCTCCGCCTCTCCTCCGTCCTCTCCTCCCCCTCTCTCTTCTCCTCCACCCTCCGTCATCTCCGCTCTCTCTCCCTCCCCCACAAGTACCTCCTCATCGGCCGCCACCTCCTCTTCTCCCTCCACCGCATCACCGTCCACTTCCTCTCCGACCCCACCCTGCGGCCGCCCATCTCCACCGCCATTCGACATACTGATCTCGACGCTGTTCTCCTCCTCCTCTTTCTCTGCGAAACCCACCAACACAATCCCACAGTCCTCGAGGAGAATTATTCAGATTGGCGGGTCAGCTTGTGTAATCTTTTCTCTCATGAGTTGTTGACAGCTGCTTATTCTCCCGTGGGAACCTGTACTTGGACAGCTCTGGCTCCTTACGTTGACATGGTGAGTCGGAGCTGGAGACTTGTGAGGGTGAGCTGCCGCGGTGGGAAGAAGGGGGCGTCGGCGGAGACCCTGGTGGAGCTTCCGACGGTGGACTTGAAGGAGGGAGGGAGGGAGTGTGTGATATGTAAAGAGGAGATGAAGGTAGGGAGGGATGTGTGTAAATTACCGTGCGAGCATTTGTTTCACTGGAGGTGTGTATTGCCGTGGCTGAAGAACAACGACATGTGCCCTTGCTGTCGGTATCGGTTGCCGTCCGATGATGTCTTCGGAGAGATCCAACGGCTCTGGGAAATGTTAATCAAACTGGGTGCCAAGCAAAGCCTGGTTTAG 1074 0.5363 MEAPLISSKKKKTGGQATTPSRFTIKNLTRSADKKKDEEKPVTCSTIAKFHVGSKSIKRHRLVLKTFTFKSHSQIPDYLESQARDPMMEDSATILAALSTLSPSQLSRLSLSLLSATHRHNLRLSSVLSSPSLFSSTLRHLRSLSLPHKYLLIGRHLLFSLHRITVHFLSDPTLRPPISTAIRHTDLDAVLLLLFLCETHQHNPTVLEENYSDWRVSLCNLFSHELLTAAYSPVGTCTWTALAPYVDMVSRSWRLVRVSCRGGKKGASAETLVELPTVDLKEGGRECVICKEEMKVGRDVCKLPCEHLFHWRCVLPWLKNNDMCPCCRYRLPSDDVFGEIQRLWEMLIKLGAKQSLV 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3084 357 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 257 334 IPR013083 -
Prci3g3084 357 MobiDBLite consensus disorder prediction 11 27 - -
Prci3g3084 357 Pfam Ring finger domain 286 328 IPR001841 -
Prci3g3084 357 SMART ring_2 287 327 IPR001841 -
Prci3g3084 357 CDD RING-H2_PA-TM-RING 286 328 - -
Prci3g3084 357 MobiDBLite consensus disorder prediction 1 39 - -
Prci3g3084 357 ProSiteProfiles Zinc finger RING-type profile. 287 328 IPR001841 -
Prci3g3084 357 SUPERFAMILY RING/U-box 283 334 - -
Prci3g3084 357 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 214 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3084 Prci-Chr3 42170339 42171602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3084 88 349 C3H Transcription Factor Family AT5G02750 44.840 1.18e-68 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3084 K11982 - pcin:129304395 661.759