Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3074 ATGGAAGTTGAGGAAGCAGAAAGAGTAGTAGTGATTGCAAAACCAATTGCTTCAAGACCTGCTTGCTCCACCTTTAGACCTCTCTCAGTTGCAGGTGCCATTAATGCATCTTCTTCCGCTGTTCAATCTTCTCAAACACCAGATTCGGCCATTAGACCCAAAACTGTGAGGTTCAAGCCATCCCTGTATCACCCTCTTCCTCCTGCCGGGTTTGATTCTTCTCAGTGGGCGAAATCTGACAAGATTTACAAGCCAATGGCAAAACTTGCATCAAAGACCACTGTCTCTCTTTTGGCAAATATGAGAAATTGCAGCACCAGTTATCATCAACCTCCACTGCAAGAAAAGTTCAGGTCCTATTCGCACCCAAATAGTAATGGCCCACAAGCAGCTGAACCTTGTAAGGTGGTACCACAGAACATGATAGAGGAAGACACAAAAGCTTTAACATTCCATAATCATGGCGCTCGACCTTCATATGATGGATACAACTGGAGAAAATATGGGCAGAAGCAGGTTAAAGGAAGTGAGTATCCGAGGAGTTATTATAAATGCACAAATCCTAATTGTCCAGCCAAGAAGAAGGTGGAAAGATCACTTGATGGCCAGATTACAGAGATAGTATATAATGGTGAGCACAATCATTCAAAGCCTCAGCCTCTTAAGCGAAACCCAGCTTTAGGATCTGAATTGGTGGGTGATGGAATGAGTCAAGACAGTAACACATACAACAATTTAGGGAGCAGTGACAATGGAGAGAGGAAAGAAGACAAAGCTCCGTTGGTTGATGGTGGTGAGGGAAGAAGCAAGGAGTTTGAGGTAGAGGAAGATGAGCTTAGCAGTAAAAGAAGGAAAAATGAGAATCAATCATACGGAACAGTGGTTTCAGAGGATAGTGAAGAGCCGGTAAGGGTGGTACCAAGTTCTGCAGATTCTGAAATAGTAGGAGACGGCTTTCGCTGGAAAAAATATGGGCAGAAGGTTGTGAAAGGCAATCCATATCCCAGAAGTTACTACAGATGTACTAACATGAAGTGCAAGGTGAGAAAACATGTAGAAAGAGCAATAGATGAGCCAAGATCATTTATCACCAAGTACGAGGGAAAGCACAACCACGAGATGCCACTCAGGATTATTAGGAATGACAACGTTAACGACCAAGATTCACAGGCCGAGCTTGCTTCTCTTCAATAA 1194 0.4338 MEVEEAERVVVIAKPIASRPACSTFRPLSVAGAINASSSAVQSSQTPDSAIRPKTVRFKPSLYHPLPPAGFDSSQWAKSDKIYKPMAKLASKTTVSLLANMRNCSTSYHQPPLQEKFRSYSHPNSNGPQAAEPCKVVPQNMIEEDTKALTFHNHGARPSYDGYNWRKYGQKQVKGSEYPRSYYKCTNPNCPAKKKVERSLDGQITEIVYNGEHNHSKPQPLKRNPALGSELVGDGMSQDSNTYNNLGSSDNGERKEDKAPLVDGGEGRSKEFEVEEDELSSKRRKNENQSYGTVVSEDSEEPVRVVPSSADSEIVGDGFRWKKYGQKVVKGNPYPRSYYRCTNMKCKVRKHVERAIDEPRSFITKYEGKHNHEMPLRIIRNDNVNDQDSQAELASLQ 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3074 397 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 108 382 IPR044810 GO:0003700
Prci3g3074 397 MobiDBLite consensus disorder prediction 210 300 - -
Prci3g3074 397 FunFam WRKY transcription factor 303 376 - -
Prci3g3074 397 SMART WRKY_cls 159 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g3074 397 SMART WRKY_cls 315 374 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g3074 397 Pfam WRKY DNA -binding domain 317 373 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g3074 397 Pfam WRKY DNA -binding domain 161 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g3074 397 Gene3D WRKY domain 146 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci3g3074 397 Gene3D WRKY domain 301 376 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci3g3074 397 SUPERFAMILY WRKY DNA-binding domain 156 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci3g3074 397 FunFam WRKY transcription factor 147 219 - -
Prci3g3074 397 MobiDBLite consensus disorder prediction 234 249 - -
Prci3g3074 397 ProSiteProfiles WRKY domain profile. 161 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g3074 397 ProSiteProfiles WRKY domain profile. 310 375 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g3074 397 MobiDBLite consensus disorder prediction 250 285 - -
Prci3g3074 397 SUPERFAMILY WRKY DNA-binding domain 310 375 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3074 Prci-Chr3 42088768 42091528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3074 82 376 WRKY Transcription Factor Family AT2G37260 45.970 7.24e-77 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci3g3074 WRKY 3.8e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3074 - - pcin:129305131 810.446