Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Prci3g3073 | ATGACAAGGGACGCCCTCATGAGCATTGATGGTGATGATAAAGAATTTCATGAATTGGCTCAGCGTCTACGAGATGGTGAAAAAACGACCAAAGAGGGAGTTGCTGGTGACGAACATAGTTTTCGTGAGGATGATGAGTTAAAAAGTAATGGAAAAGCTGAAGAAGTTAAAGTGGGACAAGATGGGATTGTGGAAGCCCCAGGAATTCAGCACATGCCACAACAACAGCCTCAAGGGGCAATTTGGGAGAGATTCCTACATCTCAGATCCCTCAAGGTCTTGCTTGTGGAGATTGATGACTCTACTCGACATGTTGTCGCAGCACTGCTACGCAATTGTAGTTATGAAGTTATTGAAGCAGCAAACGGATTGCAAGCATGGAAGATCTTGGAGGATCTGACCAGTCAAATAGATCTTGTCTTGACTGAGGTGGCAATGCCTTGCTTATCAGGCATTGGCCTTCTGTCTAAAATTATGGGCCACAAAACACGGAAAAACATTCCCGTAATTATGATGTCATCTCATGACTCTATGGGTTTAGTCTTTAAGTGTTTGTCAAAGGGTGCTGTTGACTTTCTAGTGAAACCTATACGGAAGAATGAGCTTAAAAACTTGTGGCAGCATGTGTGGAGAAGATGTCATAGTTCAAGTGGCAGTGGAAGTGAAAGTGGCACACAAACTCAGAAATCCTTTAAATCAAAGAGTCTTGAGAAGTTTGATAACAATAGTGGCAGCAACGATGAAGAAGACAATGGTAGTGTGGGTCTAAATAACGTGGATGGAAGTGACAATGGTAGTGGTACTCAGAGCTCATGGACCAAACAAGCTGTAGAAGTTGACAGTCCCAAACCATCCCAGTGGGATCATATAGCTGAGTGCCCTGATAGCACCTGTGCTCAAGAAGTTCTCTCAAATGCTGATAGTGGAAACAAGATGTTTTCTGTAGCCATAAAGGAGTGTCCAGATCAGAAGGATCAGCTTGGTAAGAGTAAAATTAGGGATCTCGGCTTGATTCTTGACTATAGAAATGAGGTCATGGCCAATACTTTGGGCGAAAAGCATAGCAACCCACTTGATATAGGCTCCTCTAAATTCAATGGGCAACTTAATAGAGGACAGCTGGAACTTCACTGTGAAGATCCTTCTAGCAAGTTGAGATGCAAAGGTCCATTTCAATCTGATGCTGTTACTAGTACGCACAATTTGCGCATTCATGGTGGAGAATTTGAAGTCTCAAATAGAAGGACCAAGCCCTCGGATACTGAAAGCAAAGCTATCAATGATGATGGAGAATTGCCGTCACTTGAGCTCAGTTTAAAGAGACTTAGAGGAGTTAAAGATGCTGGTATTACAATTCAGGATGAGCGGAATGTTTTAAGACGTTCAGACCTTTCAGCCTTTTCAAGGTACAATGCGGCTTCTAATGCAAAGAAATCTCCTGGTGGTTGTGCTGGAAGCAATTCTCCCCATAATAATAGCTTAGAAGTTACAAAGAAAGATTCATCACGTGACATCCAGTCTCATTCTAGTGGAAATCCTCCTAACCAGAACTCGAATGGTGCCAGTAATAACATTGACATGGGCTCCACGACTGATAATGCCTTCACTAAATCTGCTGTTATGAGCAAGACAACAGTGGCTTCACCAACTAAATGTTTGTATCAATCTTCTGCCTTCGAGCCTATAAAAAACAACTTTATGTGTGCCTCTCAACAAGTTGCAGTACATAATACTGAAGATACGACAGCCTCAACTATGCTAGAACCACCTAGAGGAGGTATACACAAGGACTCTCCAACACAGGACTTCCATGGCATATACAAAAACCATAGGTGCATCGTTAATAACATGCAGCACCAGCTACCTCCGGACCATGATGATGCCTCATCAAAGAAAATTGCTGCCACAGCTCCACATTGTGGGTCATCAGATGTAGTTGAAATGGTTGAAGGTAATGTTGGAAATTATAGCATCAATAGAAGTGTGTCGGGAAGCAACAATGCAAGCAACGGACAAAATGGGAGCAGCACCGCAGTCAATGCTGGAGGGATAAACATAAACATAGAAAATAGCATTGGAATTGCTGGGAATTGTCGAGGTGGTGTTGCTAGTGGGAGTGGGAGTGCTAACAGAATAGATCAGAAGACTTCTCAAAGAGAAGCAGCCTTAACTAAATTTCGCCAGAAGAGGAAAGAGAGGTGCTTCCGGAAAAAGGTTCGATATCAAAGCAGAAAGAAACTAGCTGAACAACGACCTCGCTTTCGTGGACAATTTGTTCGACAGGCCTCCAACAAAAGTACAAGTGAGACAGATGGGGCAACTGATAGCTGA | 2331 | 0.4294 | MTRDALMSIDGDDKEFHELAQRLRDGEKTTKEGVAGDEHSFREDDELKSNGKAEEVKVGQDGIVEAPGIQHMPQQQPQGAIWERFLHLRSLKVLLVEIDDSTRHVVAALLRNCSYEVIEAANGLQAWKILEDLTSQIDLVLTEVAMPCLSGIGLLSKIMGHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSFKSKSLEKFDNNSGSNDEEDNGSVGLNNVDGSDNGSGTQSSWTKQAVEVDSPKPSQWDHIAECPDSTCAQEVLSNAEXSGNKMFSVAIKECPDQKDQLGKSKIRDLGLILDYRNEVMANTLGEKHSNPLDIGSSKFNGQLNRGQLELHCEDPSSKLRCKGPFQSDAVTSTHNLRIHGGEFEVSNRRTKPSDTESKAINDDGELPSLELSLKRLRGVKDAGITIQDERNVLRRSDLSAFSRYNAASNAKKSPGGCAGSNSPHNNSLEVTKKDSSRDIQSHSSGNPPNQNSNGASNNIDMGSTTDNAFTKSAVMSKTTVASPTKCLYQSSAFEPIKNNFMCASQQVAVHNTEDTTASTMLEPPRGGIHKDSPTQDFHGIYKNHRCIVNNMQHQLPPDHDDASSKKIAATAPHCGSSDVVEMVEGNVGNYSINRSVSGSNNASNGQNGSSTAVNAGGININIENSIGIAGNCRGGVASGSGSANRIDQKTSQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRFRGQFVRQASNKSTSETDGATDS | 777 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Prci3g3073 | 777 | MobiDBLite | consensus disorder prediction | 744 | 777 | - | - | |
| Prci3g3073 | 777 | FunFam | Two-component response regulator-like PRR37 | 91 | 249 | - | - | |
| Prci3g3073 | 777 | MobiDBLite | consensus disorder prediction | 584 | 603 | - | - | |
| Prci3g3073 | 777 | ProSiteProfiles | Response regulatory domain profile. | 92 | 210 | IPR001789 | GO:0000160 | |
| Prci3g3073 | 777 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 91 | 278 | IPR045279 | GO:0009736 | |
| Prci3g3073 | 777 | Pfam | Response regulator receiver domain | 93 | 204 | IPR001789 | GO:0000160 | |
| Prci3g3073 | 777 | MobiDBLite | consensus disorder prediction | 246 | 280 | - | - | |
| Prci3g3073 | 777 | Gene3D | - | 90 | 247 | - | - | |
| Prci3g3073 | 777 | MobiDBLite | consensus disorder prediction | 507 | 533 | - | - | |
| Prci3g3073 | 777 | MobiDBLite | consensus disorder prediction | 216 | 291 | - | - | |
| Prci3g3073 | 777 | MobiDBLite | consensus disorder prediction | 758 | 777 | - | - | |
| Prci3g3073 | 777 | SUPERFAMILY | CheY-like | 89 | 215 | IPR011006 | - | |
| Prci3g3073 | 777 | MobiDBLite | consensus disorder prediction | 660 | 682 | - | - | |
| Prci3g3073 | 777 | CDD | psREC_PRR | 93 | 196 | - | - | |
| Prci3g3073 | 777 | SMART | REC_2 | 91 | 206 | IPR001789 | GO:0000160 | |
| Prci3g3073 | 777 | MobiDBLite | consensus disorder prediction | 216 | 232 | - | - | |
| Prci3g3073 | 777 | Pfam | CCT motif | 720 | 762 | IPR010402 | GO:0005515 | |
| Prci3g3073 | 777 | ProSiteProfiles | CCT domain profile. | 720 | 762 | IPR010402 | GO:0005515 | |
| Prci3g3073 | 777 | MobiDBLite | consensus disorder prediction | 476 | 496 | - | - | |
| Prci3g3073 | 777 | MobiDBLite | consensus disorder prediction | 476 | 533 | - | - | |
| Prci3g3073 | 777 | MobiDBLite | consensus disorder prediction | 17 | 51 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Prci3g3073 | Prci-Chr3 | 42071205 | 42083710 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Prci3g3073 | 167 | 764 | Response Regulator Gene Family | AT5G02810 | 46.216 | 5.43e-116 | 361 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TR | Pseudo ARR-B | Prci3g3073 | Response_reg | 4.5e-20 | CL0304 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Prci3g3073 | K12129 | - | gmx:100796933 | 1034.25 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Prci3g3073 | 3 | 42071205 | 42083710 | Prci3g3073 | 3 | 42071205 | 42083710 | ECH |