Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3061 ATGTACGGAACTCCGTTAGAGAGGCACATAGCTGGATATGGCTCGTTGGATCCAAGTGGGTTCGTGGATGTAGTGGGCATTTATTTTCCTCAGCAGCTTTTCACAGTCGAGCAAAGCTGGCTCGACCTTACGTCTGCTCTCGTCTCTTTCTTCTCTTCTCCATCGGGCCAAAACCTAACTTCCCAGGTAAAAAATCATCACGGCAGCTTTGCATTGTCACTTGACTTCCAGCAGTTTCAAAAAATATGTCATATTGAGGAATTTTATAAGATGTTAGAGGAGAAGCCTAAAATCGCTCTCTTGTGCATGAGCGCTGCAGTTCATAAGGTTCTTATTACCAAATGGGAGAGTGACCAACTTGAGGATGGTGCAAAAGTAGACATCCGACTGCATAACTGTCCAGAAACTATGATTGCTCTGAAAAACTTGAAAGCAGCATATATTGTGCGTGGTACTGTGGTGAAGGCCACCACTGTCAGGCCTCTCGTGACAGAAATGAGTTTTGAATGCGGAAAGTGCAAACAAAGAATTAGGCGTATATTTCCTGATGGAAAATTTTCACCACCCTCAATCTGCAATCTGAATGGCTGCAAGAGCAAAATGTTTAACCCATTACGATCTACAGCTCAAGCTATAGATTTTCAGAAAATAAGGTTGCAAGAACTCCTAAAACCCGAAGACCATGAAGAAGGAAGAGTTCCTCGAACAGTGGAATGCGAGCTTATCCAAGATCTCGTTGATATGTGCATACCTGGAGATGTGTTGACTGTTACTGGAATTATAAGAGGAATTAACACTTACATGGATATTGGAGGAGGAAAATCGAAGAACAGAAGCCAGGGATTTTACTATTTGTATCTCGAAGCTGTTTCCATACAAAATTCCAAGTCACAGTCTGCAAATGAGGATTTGCAAGATACTAATTCCAAAGCAAGACCAGCTGAGCTGCTTGATTTGTTTTCATTTTCTTCCAGGGATTTAGAGTTTATTGTGAAATTTTCAATGGAGCATGGCTCGGATTTATTTCGGCAAATCCTTCAATCTATATGCCCATCTATCTATGGGCATGAGCTTGTTAAAGCTGGGATTACGCTGGCATTATTTGGGGGAGTACGAAAACATTCTATCGATCAGAATAAGGTTCCTGTAAGGGGCGACATTCATGTCATAATCGTCGGTGATCCTGGACTGGGCAAGAGCCAATTGCTGCAAGCAGCAGCCGCTGTTTCTCCACGAGGCATCTATGTCTGTGGTAATGCAACAACAAAAGCCGGCCTCACAGTAGCTGTAGTAAAGGATCCTACGACGAGTGACTATGCTTTTGAGGCCGGTGCTATAGTGCTGGCTGATAGTGGATTGTGTTGTATTGATGAGTTCGATAAAATGTCAGCTGAACATCAGGCTCTACTGGAGGCCATGGAACAACAGTGTGTCTCTATTGCAAAGGCAGGACTGGTCGCAAGTTTATCAGCTCGAACTTCTGTGTTAGCGGCAGCAAATCCAGTCGGCGGTCATTATAACCGTGCAAAAACTGTGAATGAAAACTTGAAAATGAGTGCCGCCCTGCTGTCCCGATTTGATCTAGTTTTCATACTGCTGGATAAACCTGATGAACTTCTGGACAAGCGAGTCTCGGAGCACATAATGTCACTGCATGCTGGGAATGGACAACTAGCAGTCAAAAAGCAACGTAGAGATTTACCTTCTGATTCGAGAATTATGGTGCCACAGAATGCTGAAAGCATAGATTTAGGGGTTAGATCTGGTTCTTTAGTTTCAAAGTTGAGACTTGACCCACAAAGAGATAGTGACTTTGTTCCATTGCCTACTCAACTTCTTCGAAAATACATTGCTTATGCGAGGAGTTTTGTCTTCCCTAGGATGTCCAAACCCGCAGCAGAAATCCTACAAAAGTTTTACCTTAGACTGAGAGATCATAATACTTCAGCTGACGGTACACCGATAACGGCAAGGCAACTTGAAAGCCTAGTGAGGCTGGCTGAAGCTCGAGCTCGGCTAGACTTGAGAGAAGAAATAACGGCCCAGGATGCCATGGATGTAGTTGAAATAATGAAGGAATCCCTGTATGATAAATATGTTGATGAGCATGGATTTGTGGATTTTGGACGAAGTGGGGGAATGAGTCAACAGAAAGAGGCGAAACGCTTCCTAAGTGCCCTCAATAAACAATCAGAATTCCAGCAGAAAGATTGTTTTTCAATATCCGAAATATATAGTCTGGCGGATAGGATTGGCCTACAAGTGCCTGATATTGACACTTTCATCGATAATTTAAATAGCGTTGGTTATCTACTCAAAAAGGGACCCAAGACATTCCAGGTGTTATCCTCCTCATGTACACGAAGCCAATCAACTAGGGTAAAGGGCTAA 2391 0.4316 MYGTPLERHIAGYGSLDPSGFVDVVGIYFPQQLFTVEQSWLDLTSALVSFFSSPSGQNLTSQVKNHHGSFALSLDFQQFQKICHIEEFYKMLEEKPKIALLCMSAAVHKVLITKWESDQLEDGAKVDIRLHNCPETMIALKNLKAAYIVRGTVVKATTVRPLVTEMSFECGKCKQRIRRIFPDGKFSPPSICNLNGCKSKMFNPLRSTAQAIDFQKIRLQELLKPEDHEEGRVPRTVECELIQDLVDMCIPGDVLTVTGIIRGINTYMDIGGGKSKNRSQGFYYLYLEAVSIQNSKSQSANEDLQDTNSKARPAELLDLFSFSSRDLEFIVKFSMEHGSDLFRQILQSICPSIYGHELVKAGITLALFGGVRKHSIDQNKVPVRGDIHVIIVGDPGLGKSQLLQAAAAVSPRGIYVCGNATTKAGLTVAVVKDPTTSDYAFEAGAIVLADSGLCCIDEFDKMSAEHQALLEAMEQQCVSIAKAGLVASLSARTSVLAAANPVGGHYNRAKTVNENLKMSAALLSRFDLVFILLDKPDELLDKRVSEHIMSLHAGNGQLAVKKQRRDLPSDSRIMVPQNAESIDLGVRSGSLVSKLRLDPQRDSDFVPLPTQLLRKYIAYARSFVFPRMSKPAAEILQKFYLRLRDHNTSADGTPITARQLESLVRLAEARARLDLREEITAQDAMDVVEIMKESLYDKYVDEHGFVDFGRSGGMSQQKEAKRFLSALNKQSEFQQKDCFSISEIYSLADRIGLQVPDIDTFIDNLNSVGYLLKKGPKTFQVLSSSCTRSQSTRVKG 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3061 796 Gene3D - 162 212 - -
Prci3g3061 796 Gene3D - 146 264 IPR012340 -
Prci3g3061 796 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 60 733 IPR031327 GO:0003677|GO:0005524|GO:0032508
Prci3g3061 796 PRINTS Mini-chromosome maintenance (MCM) protein family signature 384 399 IPR001208 GO:0003677|GO:0005524|GO:0032508
Prci3g3061 796 PRINTS Mini-chromosome maintenance (MCM) protein family signature 444 458 IPR001208 GO:0003677|GO:0005524|GO:0032508
Prci3g3061 796 PRINTS Mini-chromosome maintenance (MCM) protein family signature 522 530 IPR001208 GO:0003677|GO:0005524|GO:0032508
Prci3g3061 796 PRINTS Mini-chromosome maintenance (MCM) protein family signature 495 507 IPR001208 GO:0003677|GO:0005524|GO:0032508
Prci3g3061 796 PRINTS Mini-chromosome maintenance (MCM) protein family signature 471 484 IPR001208 GO:0003677|GO:0005524|GO:0032508
Prci3g3061 796 SMART AAA_5 385 537 IPR003593 GO:0016887
Prci3g3061 796 SUPERFAMILY Nucleic acid-binding proteins 67 265 IPR012340 -
Prci3g3061 796 FunFam DNA helicase MCM8 isoform X1 162 213 - -
Prci3g3061 796 Pfam MCM AAA-lid domain 612 695 IPR041562 -
Prci3g3061 796 Pfam MCM P-loop domain 335 552 IPR001208 GO:0003677|GO:0005524|GO:0032508
Prci3g3061 796 Coils Coil 456 476 - -
Prci3g3061 796 CDD MCM8_WHD 717 782 - -
Prci3g3061 796 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 351 701 IPR027417 -
Prci3g3061 796 CDD MCM8 345 694 - -
Prci3g3061 796 Gene3D - 319 704 IPR027417 -
Prci3g3061 796 ProSiteProfiles MCM family domain profile. 341 548 IPR001208 GO:0003677|GO:0005524|GO:0032508
Prci3g3061 796 SMART mcm 136 696 IPR031327 GO:0003677|GO:0005524|GO:0032508
Prci3g3061 796 Pfam MCM OB domain 143 263 IPR033762 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3061 Prci-Chr3 41996982 42004313 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3061 16 782 Core DNA Replication Machinery Family AT3G09660 71.392 0.0 1144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3061 K10737 - gmx:100784549 1302.35