Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3052 ATGGGGAGGAAGGGGAATTGGTTTTCTAGTGTGAAGAAAGCTCTCAGTCCTGAGTCAAAGAAGAGGGAAGACGAGAGATCAAATAAATCAAAGAAGAAATGGTTTGGGAAGCAAAAATTGCAGACTTCAGACTCATACTTGGAAACTGATAAAGCACTATCTCTTTCACCACCAGAAGAGGTCAAATTAACTAATATTGAGAATGAAAACAATCATGCTCCTGATGCTGATGTTGAAGTTGAAGTTACAAATGCTGTAGATACTGAGGAACCTGTTCCTGCAGTTCAAACAGCCCCTGTTCCAGTTCAAGCTTCTATAATTCCTCTGCCTTCTAGGAAATTGAGTGCTGAAGTAGCAGCAATGAAGATTCAAACAGCTTTTCGAGGATACATGGCAAGAAGAGCATTGAGGGCTTTAAGAGGCCTGGTTAGGTTGAAATCTTTGATGGAAGGGCCAGCTGTAAAACGCCAAGCCACTAGTACTCTTCGCTCTATGCAGACTCTAGCTCGTTTGCAAGCTCAGATACGAACCAGGAGGATCAGAATGTTAGAGGAGAATCAAGCTCTTCAGAGACAGTTCTTACAGAAGCATGCAAAAGAGCTTAGCCTTCAGATGGGAGATGAATGGGATGATAGCCTCCAATCAAAGGAACAAATTGAAGCCAAGTTGCTGAGCAAGTACGAGGCTACAGTGAGGAGAGAAAGAGCATTGGCTTATGCATTCTCTCACCAGCAAAATGGAAAGAATTCAACTAGATCTATAAACCCAGTTTTTATGGATCCAACTAATCCGGCATGGGGTTGGAGCTGGCTGGAGCGATGGATGGCAGCCCGGCCCTGGGAAAGCAAAGATGTGAATGACCAGTCATCGGTCAAAAGCTCGACCCGCAGCATAACTGGCGGAGAGATCAGTAAATCCTATGCTCGATACCAGCTCAACTCTGAAAAGCACTCTCCAACAGCCAGCCAAAACCTAGGCTCCCCGAGCTTTCATTCCCACTCAACTCCTTCCAAGGCACTTGTTTCTTCAGCCTCAGTTATCAAGAAACTGAAAAAAGTGAGCCCCAAGGTCACCTCAGTTATTGATGATGACACCAAAAGCATGGTCAGTGTGCAGTCTGGTTTTCGGAGGCACTCCATCGCTGGATCATCTGTGGGAGACGACGAGAGCCTTGCAAGCTTTCAGGCTGTTCCAAGCTACATGGTGCCAACTCAGTCTGCAAAAGCCAAGTCCAAGCCGCTCAGTCCATTAACTGTAGAGAATGACACAGTAGAGAAGGGATCCTCTGGGACAGTGAAGAAACGGCTTTCCTTCCCTCCTTCACCGGCAAGGCCGAGACGGCATTCAGGTCCACCAAAGGTAGAAAGCAGCTTCAATGCAGAGGTCACCGTCGGTAATAGTGTGGCTGATTGA 1413 0.465 MGRKGNWFSSVKKALSPESKKREDERSNKSKKKWFGKQKLQTSDSYLETDKALSLSPPEEVKLTNIENENNHAPDADVEVEVTNAVDTEEPVPAVQTAPVPVQASIIPLPSRKLSAEVAAMKIQTAFRGYMARRALRALRGLVRLKSLMEGPAVKRQATSTLRSMQTLARLQAQIRTRRIRMLEENQALQRQFLQKHAKELSLQMGDEWDDSLQSKEQIEAKLLSKYEATVRRERALAYAFSHQQNGKNSTRSINPVFMDPTNPAWGWSWLERWMAARPWESKDVNDQSSVKSSTRSITGGEISKSYARYQLNSEKHSPTASQNLGSPSFHSHSTPSKALVSSASVIKKLKKVSPKVTSVIDDDTKSMVSVQSGFRRHSIAGSSVGDDESLASFQAVPSYMVPTQSAKAKSKPLSPLTVENDTVEKGSSGTVKKRLSFPPSPARPRRHSGPPKVESSFNAEVTVGNSVAD 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3052 470 MobiDBLite consensus disorder prediction 314 336 - -
Prci3g3052 470 MobiDBLite consensus disorder prediction 15 31 - -
Prci3g3052 470 MobiDBLite consensus disorder prediction 403 470 - -
Prci3g3052 470 MobiDBLite consensus disorder prediction 403 426 - -
Prci3g3052 470 Pfam IQ calmodulin-binding motif 119 137 IPR000048 GO:0005515
Prci3g3052 470 SMART iq_5 115 137 IPR000048 GO:0005515
Prci3g3052 470 PANTHER IQ-DOMAIN 5-RELATED 1 451 - -
Prci3g3052 470 MobiDBLite consensus disorder prediction 1 41 - -
Prci3g3052 470 ProSiteProfiles IQ motif profile. 116 144 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3052 Prci-Chr3 41953918 41958540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3052 1 469 IQD Protein Family AT5G03040 50.408 5.70e-134 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3052 - - gmx:100800080 634.024